Garcia BA - Search Results

1

An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer's disease.

Nativio R, Lan Y, Donahue G, Sidoli S, Berson A, Srinivasan AR, Shcherbakova O, Amlie-Wolf A, Nie J, Cui X, He C, Wang LS, Garcia BA, Trojanowski JQ, Bonini NM, Berger SL. Nativio R, et al. Among authors: garcia ba. Nat Genet. 2020 Oct;52(10):1024-1035. doi: 10.1038/s41588-020-0696-0. Epub 2020 Sep 28. Nat Genet. 2020. PMID: 32989324 Free PMC article.

2

Stable-isotope-labeled histone peptide library for histone post-translational modification and variant quantification by mass spectrometry.

Lin S, Wein S, Gonzales-Cope M, Otte GL, Yuan ZF, Afjehi-Sadat L, Maile T, Berger SL, Rush J, Lill JR, Arnott D, Garcia BA. Lin S, et al. Among authors: garcia ba. Mol Cell Proteomics. 2014 Sep;13(9):2450-66. doi: 10.1074/mcp.O113.036459. Epub 2014 Jul 7. Mol Cell Proteomics. 2014. PMID: 25000943 Free PMC article.

3

Histone methylation has dynamics distinct from those of histone acetylation in cell cycle reentry from quiescence.

Mews P, Zee BM, Liu S, Donahue G, Garcia BA, Berger SL. Mews P, et al. Among authors: garcia ba. Mol Cell Biol. 2014 Nov;34(21):3968-80. doi: 10.1128/MCB.00763-14. Epub 2014 Aug 25. Mol Cell Biol. 2014. PMID: 25154414 Free PMC article.

4

Defining heterochromatin in C. elegans through genome-wide analysis of the heterochromatin protein 1 homolog HPL-2.

Garrigues JM, Sidoli S, Garcia BA, Strome S. Garrigues JM, et al. Among authors: garcia ba. Genome Res. 2015 Jan;25(1):76-88. doi: 10.1101/gr.180489.114. Epub 2014 Dec 2. Genome Res. 2015. PMID: 25467431 Free PMC article.

5

Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH) Analysis for Characterization and Quantification of Histone Post-translational Modifications.

Sidoli S, Lin S, Xiong L, Bhanu NV, Karch KR, Johansen E, Hunter C, Mollah S, Garcia BA. Sidoli S, et al. Among authors: garcia ba. Mol Cell Proteomics. 2015 Sep;14(9):2420-8. doi: 10.1074/mcp.O114.046102. Epub 2015 Jan 30. Mol Cell Proteomics. 2015. PMID: 25636311 Free PMC article.

6

Drawbacks in the use of unconventional hydrophobic anhydrides for histone derivatization in bottom-up proteomics PTM analysis.

Sidoli S, Yuan ZF, Lin S, Karch K, Wang X, Bhanu N, Arnaudo AM, Britton LM, Cao XJ, Gonzales-Cope M, Han Y, Liu S, Molden RC, Wein S, Afjehi-Sadat L, Garcia BA. Sidoli S, et al. Among authors: garcia ba. Proteomics. 2015 May;15(9):1459-69. doi: 10.1002/pmic.201400483. Proteomics. 2015. PMID: 25641854 Free PMC article.

7

Characterization of BRD4 during mammalian postmeiotic sperm development.

Bryant JM, Donahue G, Wang X, Meyer-Ficca M, Luense LJ, Weller AH, Bartolomei MS, Blobel GA, Meyer RG, Garcia BA, Berger SL. Bryant JM, et al. Among authors: garcia ba. Mol Cell Biol. 2015 Apr;35(8):1433-48. doi: 10.1128/MCB.01328-14. Epub 2015 Feb 17. Mol Cell Biol. 2015. PMID: 25691659 Free PMC article.

8

Bottom-up and middle-down proteomics have comparable accuracies in defining histone post-translational modification relative abundance and stoichiometry.

Sidoli S, Lin S, Karch KR, Garcia BA. Sidoli S, et al. Among authors: garcia ba. Anal Chem. 2015 Mar 17;87(6):3129-33. doi: 10.1021/acs.analchem.5b00072. Epub 2015 Mar 3. Anal Chem. 2015. PMID: 25719549 Free PMC article.

9

EpiProfile Quantifies Histone Peptides With Modifications by Extracting Retention Time and Intensity in High-resolution Mass Spectra.

Yuan ZF, Lin S, Molden RC, Cao XJ, Bhanu NV, Wang X, Sidoli S, Liu S, Garcia BA. Yuan ZF, et al. Among authors: garcia ba. Mol Cell Proteomics. 2015 Jun;14(6):1696-707. doi: 10.1074/mcp.M114.046011. Epub 2015 Mar 24. Mol Cell Proteomics. 2015. PMID: 25805797 Free PMC article.

10

Proteogenomics analysis reveals specific genomic orientations of distal regulatory regions composed by non-canonical histone variants.

Won KJ, Choi I, LeRoy G, Zee BM, Sidoli S, Gonzales-Cope M, Garcia BA. Won KJ, et al. Among authors: garcia ba. Epigenetics Chromatin. 2015 Apr 10;8:13. doi: 10.1186/s13072-015-0005-9. eCollection 2015. Epigenetics Chromatin. 2015. PMID: 25878728 Free PMC article.

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