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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2008 3
2009 1
2010 3
2011 4
2012 4
2013 1
2014 2
2015 2
2016 5
2017 2
2019 1
2020 0
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24 results
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Page 1
Differential expression in RNA-seq: a matter of depth.
Tarazona S, García-Alcalde F, Dopazo J, Ferrer A, Conesa A. Tarazona S, et al. Among authors: garcia alcalde f. Genome Res. 2011 Dec;21(12):2213-23. doi: 10.1101/gr.124321.111. Epub 2011 Sep 8. Genome Res. 2011. PMID: 21903743 Free PMC article.
Machine-learning based patient classification using Hepatitis B virus full-length genome quasispecies from Asian and European cohorts.
Mueller-Breckenridge AJ, Garcia-Alcalde F, Wildum S, Smits SL, de Man RA, van Campenhout MJH, Brouwer WP, Niu J, Young JAT, Najera I, Zhu L, Wu D, Racek T, Hundie GB, Lin Y, Boucher CA, van de Vijver D, Haagmans BL. Mueller-Breckenridge AJ, et al. Among authors: garcia alcalde f. Sci Rep. 2019 Dec 11;9(1):18892. doi: 10.1038/s41598-019-55445-8. Sci Rep. 2019. PMID: 31827222 Free PMC article.
TNFR1 mRNA expression level and TNFR1 gene polymorphisms are predictive markers for susceptibility to develop invasive pulmonary aspergillosis.
Sainz J, Salas-Alvarado I, López-Fernández E, Olmedo C, Comino A, García F, Blanco A, Gómez-Lopera S, Oyonarte S, Bueno P, Jurado M. Sainz J, et al. Among authors: garcia f, blanco a. Int J Immunopathol Pharmacol. 2010 Apr-Jun;23(2):423-36. doi: 10.1177/039463201002300205. Int J Immunopathol Pharmacol. 2010. PMID: 20646338 Free article.
Using NS5B Sequencing for Hepatitis C Virus Genotyping Reveals Discordances with Commercial Platforms.
Chueca N, Rivadulla I, Lovatti R, Reina G, Blanco A, Fernandez-Caballero JA, Cardeñoso L, Rodriguez-Granjer J, Fernandez-Alonso M, Aguilera A, Alvarez M, Galán JC, García F. Chueca N, et al. Among authors: blanco a, garcia f. PLoS One. 2016 Apr 20;11(4):e0153754. doi: 10.1371/journal.pone.0153754. eCollection 2016. PLoS One. 2016. PMID: 27097040 Free PMC article.
Combinations of Oseltamivir and T-705 Extend the Treatment Window for Highly Pathogenic Influenza A(H5N1) Virus Infection in Mice.
Marathe BM, Wong SS, Vogel P, Garcia-Alcalde F, Webster RG, Webby RJ, Najera I, Govorkova EA. Marathe BM, et al. Among authors: garcia alcalde f. Sci Rep. 2016 May 25;6:26742. doi: 10.1038/srep26742. Sci Rep. 2016. PMID: 27221530 Free PMC article.
Evidence for a crucial role of a host non-coding RNA in influenza A virus replication.
Winterling C, Koch M, Koeppel M, Garcia-Alcalde F, Karlas A, Meyer TF. Winterling C, et al. Among authors: garcia alcalde f. RNA Biol. 2014;11(1):66-75. doi: 10.4161/rna.27504. Epub 2013 Dec 20. RNA Biol. 2014. PMID: 24440876 Free PMC article.
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data.
Okonechnikov K, Conesa A, García-Alcalde F. Okonechnikov K, et al. Among authors: garcia alcalde f. Bioinformatics. 2016 Jan 15;32(2):292-4. doi: 10.1093/bioinformatics/btv566. Epub 2015 Oct 1. Bioinformatics. 2016. PMID: 26428292 Free PMC article.
Qualimap: evaluating next-generation sequencing alignment data.
García-Alcalde F, Okonechnikov K, Carbonell J, Cruz LM, Götz S, Tarazona S, Dopazo J, Meyer TF, Conesa A. García-Alcalde F, et al. Bioinformatics. 2012 Oct 15;28(20):2678-9. doi: 10.1093/bioinformatics/bts503. Epub 2012 Aug 22. Bioinformatics. 2012. PMID: 22914218
InFusion: Advancing Discovery of Fusion Genes and Chimeric Transcripts from Deep RNA-Sequencing Data.
Okonechnikov K, Imai-Matsushima A, Paul L, Seitz A, Meyer TF, Garcia-Alcalde F. Okonechnikov K, et al. Among authors: garcia alcalde f. PLoS One. 2016 Dec 1;11(12):e0167417. doi: 10.1371/journal.pone.0167417. eCollection 2016. PLoS One. 2016. PMID: 27907167 Free PMC article.
Genome-wide gene expression analysis in mouse embryonic stem cells.
Sainz J, García-Alcalde F, Blanco A, Concha A. Sainz J, et al. Among authors: garcia alcalde f, blanco a. Int J Dev Biol. 2011;55(10-12):995-1006. doi: 10.1387/ijdb.103123js. Int J Dev Biol. 2011. PMID: 22252498 Free article.
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