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Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1948 1
1949 1
1950 2
1951 2
1952 2
1953 2
1954 3
1957 6
1960 4
1961 5
1962 5
1963 5
1964 6
1965 12
1966 9
1967 14
1968 25
1969 45
1970 49
1971 96
1972 164
1973 157
1974 284
1975 370
1976 484
1977 550
1978 753
1979 1038
1980 1460
1981 1737
1982 2214
1983 2852
1984 3739
1985 4177
1986 4958
1987 6056
1988 7182
1989 9005
1990 10558
1991 11859
1992 13398
1993 15693
1994 17447
1995 18664
1996 18158
1997 17757
1998 18329
1999 19560
2000 21732
2001 22729
2002 23110
2003 24941
2004 27626
2005 28957
2006 29937
2007 30728
2008 31430
2009 33116
2010 35319
2011 38229
2012 41018
2013 42013
2014 44477
2015 45454
2016 45673
2017 43718
2018 43808
2019 46735
2020 48545
2021 50229
2022 44364
2023 41059
2024 25074
2025 2

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Search Results

1,028,889 results

Results by year

Citations

1 article found by citation matching

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Page 1
Whole genome sequencing.
Ng PC, Kirkness EF. Ng PC, et al. Methods Mol Biol. 2010;628:215-26. doi: 10.1007/978-1-60327-367-1_12. Methods Mol Biol. 2010. PMID: 20238084 Review.
We review methodologies for whole genome sequencing. There are two approaches for assembling short shotgun sequence reads into longer contiguous genomic sequences. ...We expect methodologies to evolve rapidly as sequencing technologies im …
We review methodologies for whole genome sequencing. There are two approaches for assembling short shotgun sequence rea …
Sequencing technologies and genome sequencing.
Pareek CS, Smoczynski R, Tretyn A. Pareek CS, et al. J Appl Genet. 2011 Nov;52(4):413-35. doi: 10.1007/s13353-011-0057-x. Epub 2011 Jun 23. J Appl Genet. 2011. PMID: 21698376 Free PMC article. Review.
The high-throughput - next generation sequencing (HT-NGS) technologies are currently the hottest topic in the field of human and animals genomics researches, which can produce over 100 times more data compared to the most sophisticated capillary sequencers
The high-throughput - next generation sequencing (HT-NGS) technologies are currently the hottest topic in the field of human a …
The Sequence Alignment/Map format and SAMtools.
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R; 1000 Genome Project Data Processing Subgroup. Li H, et al. Bioinformatics. 2009 Aug 15;25(16):2078-9. doi: 10.1093/bioinformatics/btp352. Epub 2009 Jun 8. Bioinformatics. 2009. PMID: 19505943 Free PMC article.
SUMMARY: The Sequence Alignment/Map (SAM) format is a generic alignment format for storing read alignments against reference sequences, supporting short and long reads (up to 128 Mbp) produced by different sequencing platforms. It is flexible in style, compac …
SUMMARY: The Sequence Alignment/Map (SAM) format is a generic alignment format for storing read alignments against reference seque
Comparison of next-generation sequencing systems.
Liu L, Li Y, Li S, Hu N, He Y, Pong R, Lin D, Lu L, Law M. Liu L, et al. J Biomed Biotechnol. 2012;2012:251364. doi: 10.1155/2012/251364. Epub 2012 Jul 5. J Biomed Biotechnol. 2012. PMID: 22829749 Free PMC article. Review.
With fast development and wide applications of next-generation sequencing (NGS) technologies, genomic sequence information is within reach to aid the achievement of goals to decode life mysteries, make better crops, detect pathogens, and improve life q …
With fast development and wide applications of next-generation sequencing (NGS) technologies, genomic sequence informat …
The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, Garimella K, Altshuler D, Gabriel S, Daly M, DePristo MA. McKenna A, et al. Genome Res. 2010 Sep;20(9):1297-303. doi: 10.1101/gr.107524.110. Epub 2010 Jul 19. Genome Res. 2010. PMID: 20644199 Free PMC article.
Next-generation DNA sequencing (NGS) projects, such as the 1000 Genomes Project, are already revolutionizing our understanding of genetic variation among individuals. ...We conclude that the GATK programming framework enables developers and analysts to quickly and e …
Next-generation DNA sequencing (NGS) projects, such as the 1000 Genomes Project, are already revolutionizing our understanding …
Analyzing Modern Biomolecules: The Revolution of Nucleic-Acid Sequencing - Review.
Dorado G, Gálvez S, Rosales TE, Vásquez VF, Hernández P. Dorado G, et al. Biomolecules. 2021 Jul 28;11(8):1111. doi: 10.3390/biom11081111. Biomolecules. 2021. PMID: 34439777 Free PMC article. Review.
The first allows to sequence small DNA fragments. The second one increases throughput, reducing turnaround and pricing, and is therefore more convenient to sequence full genomes and transcriptomes. ...Basic analyses and applications are now facilitated with n …
The first allows to sequence small DNA fragments. The second one increases throughput, reducing turnaround and pricing, and is theref …
Long-read sequencing of 111 rice genomes reveals significantly larger pan-genomes.
Zhang F, Xue H, Dong X, Li M, Zheng X, Li Z, Xu J, Wang W, Wei C. Zhang F, et al. Genome Res. 2022 May;32(5):853-863. doi: 10.1101/gr.276015.121. Epub 2022 Apr 8. Genome Res. 2022. PMID: 35396275 Free PMC article.
The concept of pan-genome, which is the collection of all genomes from a population, has shown a great potential in genomics study, especially for crop sciences. ...Compared to NipRG, the long-read sequencing-based pan-genome constructed from 10 …
The concept of pan-genome, which is the collection of all genomes from a population, has shown a great potential in genomic
Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype.
Kim D, Paggi JM, Park C, Bennett C, Salzberg SL. Kim D, et al. Nat Biotechnol. 2019 Aug;37(8):907-915. doi: 10.1038/s41587-019-0201-4. Epub 2019 Aug 2. Nat Biotechnol. 2019. PMID: 31375807 Free PMC article.
The human reference genome represents only a small number of individuals, which limits its usefulness for genotyping. We present a method named HISAT2 (hierarchical indexing for spliced alignment of transcripts 2) that can align both DNA and RNA sequences usi …
The human reference genome represents only a small number of individuals, which limits its usefulness for genotyping. We prese …
Genome sequence of the human pathogen Vibrio cholerae Amazonia.
Thompson CC, Marin MA, Dias GM, Dutilh BE, Edwards RA, Iida T, Thompson FL, Vicente AC. Thompson CC, et al. J Bacteriol. 2011 Oct;193(20):5877-8. doi: 10.1128/JB.05643-11. J Bacteriol. 2011. PMID: 21952545 Free PMC article.
Vibrio cholerae O1 Amazonia is a pathogen that was isolated from cholera-like diarrhea cases in at least two countries, Brazil and Ghana. ...The genomic analysis revealed that it contains Vibrio pathogenicity island 2 and a
Vibrio cholerae O1 Amazonia is a pathogen that was isolated from cholera-like diarrhea cases in at least two cou
Genome Sequencing.
Yoshinaga Y, Daum C, He G, O'Malley R. Yoshinaga Y, et al. Methods Mol Biol. 2018;1775:37-52. doi: 10.1007/978-1-4939-7804-5_4. Methods Mol Biol. 2018. PMID: 29876807
Strategies for sequencing fungal genomes on next-generation sequencing (NGS) platforms depend on the characteristics of the genome of the targeted species, quantity and quality of the genomic DNA, and cost considerations. Massively parallel s
Strategies for sequencing fungal genomes on next-generation sequencing (NGS) platforms depend on the characteristics of …
1,028,889 results
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