Geurts P - Search Results

1

Inferring regulatory networks from expression data using tree-based methods.

Huynh-Thu VA, Irrthum A, Wehenkel L, Geurts P. Huynh-Thu VA, et al. Among authors: geurts p. PLoS One. 2010 Sep 28;5(9):e12776. doi: 10.1371/journal.pone.0012776. PLoS One. 2010. PMID: 20927193 Free PMC article.

2

Landmark detection in 2D bioimages for geometric morphometrics: a multi-resolution tree-based approach.

Vandaele R, Aceto J, Muller M, Péronnet F, Debat V, Wang CW, Huang CT, Jodogne S, Martinive P, Geurts P, Marée R. Vandaele R, et al. Among authors: geurts p. Sci Rep. 2018 Jan 11;8(1):538. doi: 10.1038/s41598-017-18993-5. Sci Rep. 2018. PMID: 29323201 Free PMC article.

3

Inferring biological networks with output kernel trees.

Geurts P, Touleimat N, Dutreix M, d'Alché-Buc F. Geurts P, et al. BMC Bioinformatics. 2007 May 3;8 Suppl 2(Suppl 2):S4. doi: 10.1186/1471-2105-8-S2-S4. BMC Bioinformatics. 2007. PMID: 17493253 Free PMC article.

4

Statistical interpretation of machine learning-based feature importance scores for biomarker discovery.

Huynh-Thu VA, Saeys Y, Wehenkel L, Geurts P. Huynh-Thu VA, et al. Among authors: geurts p. Bioinformatics. 2012 Jul 1;28(13):1766-74. doi: 10.1093/bioinformatics/bts238. Epub 2012 Apr 25. Bioinformatics. 2012. PMID: 22539669

5

Supervised learning with decision tree-based methods in computational and systems biology.

Geurts P, Irrthum A, Wehenkel L. Geurts P, et al. Mol Biosyst. 2009 Dec;5(12):1593-605. doi: 10.1039/b907946g. Epub 2009 Oct 5. Mol Biosyst. 2009. PMID: 20023720 Review.

6

Proteomic mass spectra classification using decision tree based ensemble methods.

Geurts P, Fillet M, de Seny D, Meuwis MA, Malaise M, Merville MP, Wehenkel L. Geurts P, et al. Bioinformatics. 2005 Jul 15;21(14):3138-45. doi: 10.1093/bioinformatics/bti494. Epub 2005 May 12. Bioinformatics. 2005. PMID: 15890743

7

SCENIC: single-cell regulatory network inference and clustering.

Aibar S, González-Blas CB, Moerman T, Huynh-Thu VA, Imrichova H, Hulselmans G, Rambow F, Marine JC, Geurts P, Aerts J, van den Oord J, Atak ZK, Wouters J, Aerts S. Aibar S, et al. Among authors: geurts p. Nat Methods. 2017 Nov;14(11):1083-1086. doi: 10.1038/nmeth.4463. Epub 2017 Oct 9. Nat Methods. 2017. PMID: 28991892 Free PMC article.

8

Bridging physiological and evolutionary time-scales in a gene regulatory network.

Marchand G, Huynh-Thu VA, Kane NC, Arribat S, Varès D, Rengel D, Balzergue S, Rieseberg LH, Vincourt P, Geurts P, Vignes M, Langlade NB. Marchand G, et al. Among authors: geurts p. New Phytol. 2014 Jul;203(2):685-96. doi: 10.1111/nph.12818. Epub 2014 May 2. New Phytol. 2014. PMID: 24786523

9

Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference.

Potier D, Davie K, Hulselmans G, Naval Sanchez M, Haagen L, Huynh-Thu VA, Koldere D, Celik A, Geurts P, Christiaens V, Aerts S. Potier D, et al. Among authors: geurts p. Cell Rep. 2014 Dec 24;9(6):2290-303. doi: 10.1016/j.celrep.2014.11.038. Epub 2014 Dec 18. Cell Rep. 2014. PMID: 25533349

10

dynGENIE3: dynamical GENIE3 for the inference of gene networks from time series expression data.

Huynh-Thu VA, Geurts P. Huynh-Thu VA, et al. Among authors: geurts p. Sci Rep. 2018 Feb 21;8(1):3384. doi: 10.1038/s41598-018-21715-0. Sci Rep. 2018. PMID: 29467401 Free PMC article.

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