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Alveolate mitochondrial metabolic evolution: dinoflagellates force reassessment of the role of parasitism as a driver of change in apicomplexans.
Danne JC, Gornik SG, Macrae JI, McConville MJ, Waller RF. Danne JC, et al. Mol Biol Evol. 2013 Jan;30(1):123-39. doi: 10.1093/molbev/mss205. Epub 2012 Aug 25. Mol Biol Evol. 2013. PMID: 22923466
An assessment of vertical inheritance versus endosymbiont transfer of nucleus-encoded genes for mitochondrial proteins following tertiary endosymbiosis in Karlodinium micrum.
Danne JC, Gornik SG, Waller RF. Danne JC, et al. Protist. 2012 Jan;163(1):76-90. doi: 10.1016/j.protis.2011.03.002. Epub 2011 Jul 8. Protist. 2012. PMID: 21741306
The mitochondrial genome and transcriptome of the basal dinoflagellate Hematodinium sp.: character evolution within the highly derived mitochondrial genomes of dinoflagellates.
Jackson CJ, Gornik SG, Waller RF. Jackson CJ, et al. Genome Biol Evol. 2012;4(1):59-72. doi: 10.1093/gbe/evr122. Epub 2011 Nov 23. Genome Biol Evol. 2012. PMID: 22113794 Free PMC article.
A tertiary plastid gains RNA editing in its new host.
Jackson CJ, Gornik SG, Waller RF. Jackson CJ, et al. Mol Biol Evol. 2013 Apr;30(4):788-92. doi: 10.1093/molbev/mss270. Epub 2012 Nov 28. Mol Biol Evol. 2013. PMID: 23197592
Dinoflagellate phylogeny revisited: using ribosomal proteins to resolve deep branching dinoflagellate clades.
Bachvaroff TR, Gornik SG, Concepcion GT, Waller RF, Mendez GS, Lippmeier JC, Delwiche CF. Bachvaroff TR, et al. Mol Phylogenet Evol. 2014 Jan;70:314-22. doi: 10.1016/j.ympev.2013.10.007. Epub 2013 Oct 14. Mol Phylogenet Evol. 2014. PMID: 24135237 Free PMC article.
Endosymbiosis undone by stepwise elimination of the plastid in a parasitic dinoflagellate.
Gornik SG, Febrimarsa, Cassin AM, MacRae JI, Ramaprasad A, Rchiad Z, McConville MJ, Bacic A, McFadden GI, Pain A, Waller RF. Gornik SG, et al. Proc Natl Acad Sci U S A. 2015 May 5;112(18):5767-72. doi: 10.1073/pnas.1423400112. Epub 2015 Apr 20. Proc Natl Acad Sci U S A. 2015. PMID: 25902514 Free PMC article.
Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites.
Woo YH, Ansari H, Otto TD, Klinger CM, Kolisko M, Michálek J, Saxena A, Shanmugam D, Tayyrov A, Veluchamy A, Ali S, Bernal A, del Campo J, Cihlář J, Flegontov P, Gornik SG, Hajdušková E, Horák A, Janouškovec J, Katris NJ, Mast FD, Miranda-Saavedra D, Mourier T, Naeem R, Nair M, Panigrahi AK, Rawlings ND, Padron-Regalado E, Ramaprasad A, Samad N, Tomčala A, Wilkes J, Neafsey DE, Doerig C, Bowler C, Keeling PJ, Roos DS, Dacks JB, Templeton TJ, Waller RF, Lukeš J, Oborník M, Pain A. Woo YH, et al. Among authors: gornik sg. Elife. 2015 Jul 15;4:e06974. doi: 10.7554/eLife.06974. Elife. 2015. PMID: 26175406 Free PMC article.
Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics.
Janouškovec J, Gavelis GS, Burki F, Dinh D, Bachvaroff TR, Gornik SG, Bright KJ, Imanian B, Strom SL, Delwiche CF, Waller RF, Fensome RA, Leander BS, Rohwer FL, Saldarriaga JF. Janouškovec J, et al. Among authors: gornik sg. Proc Natl Acad Sci U S A. 2017 Jan 10;114(2):E171-E180. doi: 10.1073/pnas.1614842114. Epub 2016 Dec 27. Proc Natl Acad Sci U S A. 2017. PMID: 28028238 Free PMC article.
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