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54 results
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FIMO: scanning for occurrences of a given motif.
Grant CE, Bailey TL, Noble WS. Grant CE, et al. Bioinformatics. 2011 Apr 1;27(7):1017-8. doi: 10.1093/bioinformatics/btr064. Epub 2011 Feb 16. Bioinformatics. 2011. PMID: 21330290 Free PMC article.
MEME SUITE: tools for motif discovery and searching.
Bailey TL, Boden M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS. Bailey TL, et al. Among authors: grant ce. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W202-8. doi: 10.1093/nar/gkp335. Epub 2009 May 20. Nucleic Acids Res. 2009. PMID: 19458158 Free PMC article.
Improved similarity scores for comparing motifs.
Tanaka E, Bailey T, Grant CE, Noble WS, Keich U. Tanaka E, et al. Among authors: grant ce. Bioinformatics. 2011 Jun 15;27(12):1603-9. doi: 10.1093/bioinformatics/btr257. Epub 2011 May 4. Bioinformatics. 2011. PMID: 21543443 Free PMC article.
The MEME Suite.
Bailey TL, Johnson J, Grant CE, Noble WS. Bailey TL, et al. Among authors: grant ce. Nucleic Acids Res. 2015 Jul 1;43(W1):W39-49. doi: 10.1093/nar/gkv416. Epub 2015 May 7. Nucleic Acids Res. 2015. PMID: 25953851 Free PMC article.
MCAST: scanning for cis-regulatory motif clusters.
Grant CE, Johnson J, Bailey TL, Noble WS. Grant CE, et al. Bioinformatics. 2016 Apr 15;32(8):1217-9. doi: 10.1093/bioinformatics/btv750. Epub 2015 Dec 24. Bioinformatics. 2016. PMID: 26704599 Free PMC article.
T-Gene: improved target gene prediction.
O'Connor T, Grant CE, Bodén M, Bailey TL. O'Connor T, et al. Among authors: grant ce. Bioinformatics. 2020 Jun 1;36(12):3902-3904. doi: 10.1093/bioinformatics/btaa227. Bioinformatics. 2020. PMID: 32246829 Free PMC article.
54 results