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Methods and statistics for combining motif match scores.
Bailey TL, Gribskov M. Bailey TL, et al. J Comput Biol. 1998 Summer;5(2):211-21. doi: 10.1089/cmb.1998.5.211. J Comput Biol. 1998. PMID: 9672829
Use of keyword hierarchies to interpret gene expression patterns.
Masys DR, Welsh JB, Lynn Fink J, Gribskov M, Klacansky I, Corbeil J. Masys DR, et al. Bioinformatics. 2001 Apr;17(4):319-26. doi: 10.1093/bioinformatics/17.4.319. Bioinformatics. 2001. PMID: 11301300
Protein kinase resource: an integrated environment for phosphorylation research.
Niedner RH, Buzko OV, Haste NM, Taylor A, Gribskov M, Taylor SS. Niedner RH, et al. Proteins. 2006 Apr 1;63(1):78-86. doi: 10.1002/prot.20825. Proteins. 2006. PMID: 16435372
2HAPI: a microarray data analysis system.
Fink JL, Drewes S, Patel H, Welsh JB, Masys DR, Corbeil J, Gribskov M. Fink JL, et al. Bioinformatics. 2003 Jul 22;19(11):1443-5. doi: 10.1093/bioinformatics/btg169. Bioinformatics. 2003. PMID: 12874061
Homophila: human disease gene cognates in Drosophila.
Chien S, Reiter LT, Bier E, Gribskov M. Chien S, et al. Nucleic Acids Res. 2002 Jan 1;30(1):149-51. doi: 10.1093/nar/30.1.149. Nucleic Acids Res. 2002. PMID: 11752278 Free PMC article.
The PlantsP and PlantsT Functional Genomics Databases.
Tchieu JH, Fana F, Fink JL, Harper J, Nair TM, Niedner RH, Smith DW, Steube K, Tam TM, Veretnik S, Wang D, Gribskov M. Tchieu JH, et al. Nucleic Acids Res. 2003 Jan 1;31(1):342-4. doi: 10.1093/nar/gkg025. Nucleic Acids Res. 2003. PMID: 12520018 Free PMC article.
Wiggle-predicting functionally flexible regions from primary sequence.
Gu J, Gribskov M, Bourne PE. Gu J, et al. PLoS Comput Biol. 2006 Jul 14;2(7):e90. doi: 10.1371/journal.pcbi.0020090. Epub 2006 Jun 5. PLoS Comput Biol. 2006. PMID: 16839194 Free PMC article.
Predicting N-terminal myristoylation sites in plant proteins.
Podell S, Gribskov M. Podell S, et al. BMC Genomics. 2004 Jun 17;5(1):37. doi: 10.1186/1471-2164-5-37. BMC Genomics. 2004. PMID: 15202951 Free PMC article.
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