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Bioactivity descriptors for uncharacterized chemical compounds.
Bertoni M, Duran-Frigola M, Badia-I-Mompel P, Pauls E, Orozco-Ruiz M, Guitart-Pla O, Alcalde V, Diaz VM, Berenguer-Llergo A, Brun-Heath I, Villegas N, de Herreros AG, Aloy P. Bertoni M, et al. Among authors: guitart pla o. Nat Commun. 2021 Jun 24;12(1):3932. doi: 10.1038/s41467-021-24150-4. Nat Commun. 2021. PMID: 34168145 Free PMC article.
Exploring the OncoGenomic Landscape of cancer.
Mateo L, Guitart-Pla O, Duran-Frigola M, Aloy P. Mateo L, et al. Among authors: guitart pla o. Genome Med. 2018 Aug 3;10(1):61. doi: 10.1186/s13073-018-0571-0. Genome Med. 2018. PMID: 30071882 Free PMC article.
Bioactivity Profile Similarities to Expand the Repertoire of COVID-19 Drugs.
Duran-Frigola M, Bertoni M, Blanco R, Martínez V, Pauls E, Alcalde V, Turon G, Villegas N, Fernández-Torras A, Pons C, Mateo L, Guitart-Pla O, Badia-I-Mompel P, Gimeno A, Soler N, Brun-Heath I, Zaragoza H, Aloy P. Duran-Frigola M, et al. Among authors: guitart pla o. J Chem Inf Model. 2020 Dec 28;60(12):5730-5734. doi: 10.1021/acs.jcim.0c00420. Epub 2020 Jul 16. J Chem Inf Model. 2020. PMID: 32672454
A community challenge for a pancancer drug mechanism of action inference from perturbational profile data.
Douglass EF Jr, Allaway RJ, Szalai B, Wang W, Tian T, Fernández-Torras A, Realubit R, Karan C, Zheng S, Pessia A, Tanoli Z, Jafari M, Wan F, Li S, Xiong Y, Duran-Frigola M, Bertoni M, Badia-I-Mompel P, Mateo L, Guitart-Pla O, Chung V; DREAM CTD-squared Pancancer Drug Activity Challenge Consortium; Tang J, Zeng J, Aloy P, Saez-Rodriguez J, Guinney J, Gerhard DS, Califano A. Douglass EF Jr, et al. Among authors: guitart pla o. Cell Rep Med. 2022 Jan 18;3(1):100492. doi: 10.1016/j.xcrm.2021.100492. eCollection 2022 Jan 18. Cell Rep Med. 2022. PMID: 35106508 Free PMC article.
A PanorOmic view of personal cancer genomes.
Mateo L, Guitart-Pla O, Pons C, Duran-Frigola M, Mosca R, Aloy P. Mateo L, et al. Among authors: guitart pla o. Nucleic Acids Res. 2017 Jul 3;45(W1):W195-W200. doi: 10.1093/nar/gkx311. Nucleic Acids Res. 2017. PMID: 28453651 Free PMC article.
The Cyni framework for network inference in Cytoscape.
Guitart-Pla O, Kustagi M, Rügheimer F, Califano A, Schwikowski B. Guitart-Pla O, et al. Bioinformatics. 2015 May 1;31(9):1499-501. doi: 10.1093/bioinformatics/btu812. Epub 2014 Dec 18. Bioinformatics. 2015. PMID: 25527096 Free PMC article.
Network-based analysis of omics data: the LEAN method.
Gwinner F, Boulday G, Vandiedonck C, Arnould M, Cardoso C, Nikolayeva I, Guitart-Pla O, Denis CV, Christophe OD, Beghain J, Tournier-Lasserve E, Schwikowski B. Gwinner F, et al. Among authors: guitart pla o. Bioinformatics. 2017 Mar 1;33(5):701-709. doi: 10.1093/bioinformatics/btw676. Bioinformatics. 2017. PMID: 27797778 Free PMC article.
The Cytoscape app article collection.
Pico AR, Bader GD, Demchak B, Guitart Pla O, Hull T, Longabaugh W, Lopes C, Lotia S, Molenaar P, Montojo J, Morris JH, Ono K, Schwikowski B, Welker D, Ideker T. Pico AR, et al. Among authors: guitart pla o. F1000Res. 2014 Jul 1;3:138. doi: 10.12688/f1000research.4642.1. eCollection 2014. F1000Res. 2014. PMID: 25580224 Free PMC article.
11 results