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Page 1
Oncogenomics methods and resources.
Furney SJ, Gundem G, Lopez-Bigas N. Furney SJ, et al. Among authors: gundem g. Cold Spring Harb Protoc. 2012 May 1;2012(5):pdb.top069229. doi: 10.1101/pdb.top069229. Cold Spring Harb Protoc. 2012. PMID: 22550293
Integrative cancer genomics (IntOGen) in Biomart.
Perez-Llamas C, Gundem G, Lopez-Bigas N. Perez-Llamas C, et al. Among authors: gundem g. Database (Oxford). 2011 Sep 7;2011:bar039. doi: 10.1093/database/bar039. Print 2011. Database (Oxford). 2011. PMID: 21903633 Free PMC article.
Transcriptional activation of polycomb-repressed genes by ZRF1.
Richly H, Rocha-Viegas L, Ribeiro JD, Demajo S, Gundem G, Lopez-Bigas N, Nakagawa T, Rospert S, Ito T, Di Croce L. Richly H, et al. Among authors: gundem g. Nature. 2010 Dec 23;468(7327):1124-8. doi: 10.1038/nature09574. Nature. 2010. PMID: 21179169
BioMart Central Portal: an open database network for the biological community.
Guberman JM, Ai J, Arnaiz O, Baran J, Blake A, Baldock R, Chelala C, Croft D, Cros A, Cutts RJ, Di Génova A, Forbes S, Fujisawa T, Gadaleta E, Goodstein DM, Gundem G, Haggarty B, Haider S, Hall M, Harris T, Haw R, Hu S, Hubbard S, Hsu J, Iyer V, Jones P, Katayama T, Kinsella R, Kong L, Lawson D, Liang Y, Lopez-Bigas N, Luo J, Lush M, Mason J, Moreews F, Ndegwa N, Oakley D, Perez-Llamas C, Primig M, Rivkin E, Rosanoff S, Shepherd R, Simon R, Skarnes B, Smedley D, Sperling L, Spooner W, Stevenson P, Stone K, Teague J, Wang J, Wang J, Whitty B, Wong DT, Wong-Erasmus M, Yao L, Youens-Clark K, Yung C, Zhang J, Kasprzyk A. Guberman JM, et al. Among authors: gundem g. Database (Oxford). 2011 Sep 18;2011:bar041. doi: 10.1093/database/bar041. Print 2011. Database (Oxford). 2011. PMID: 21930507 Free PMC article.
A recurrent novel MGA-NUTM1 fusion identifies a new subtype of high-grade spindle cell sarcoma.
Diolaiti D, Dela Cruz FS, Gundem G, Bouvier N, Boulad M, Zhang Y, Chou AJ, Dunkel IJ, Sanghvi R, Shah M, Geiger H, Rahman S, Felice V, Wrzeszczynski KO, Darnell RB, Antonescu CR, French CA, Papaemmanuil E, Kung AL, Shukla N. Diolaiti D, et al. Among authors: gundem g. Cold Spring Harb Mol Case Stud. 2018 Dec 17;4(6):a003194. doi: 10.1101/mcs.a003194. Print 2018 Dec. Cold Spring Harb Mol Case Stud. 2018. PMID: 30552129 Free PMC article.
Pan-cancer analysis of whole genomes.
ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium. ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium. Nature. 2020 Feb;578(7793):82-93. doi: 10.1038/s41586-020-1969-6. Epub 2020 Feb 5. Nature. 2020. PMID: 32025007 Free PMC article.
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples.
Bailey MH, Meyerson WU, Dursi LJ, Wang LB, Dong G, Liang WW, Weerasinghe A, Li S, Li Y, Kelso S; MC3 Working Group; PCAWG novel somatic mutation calling methods working group; Saksena G, Ellrott K, Wendl MC, Wheeler DA, Getz G, Simpson JT, Gerstein MB, Ding L; PCAWG Consortium. Bailey MH, et al. Nat Commun. 2020 Sep 21;11(1):4748. doi: 10.1038/s41467-020-18151-y. Nat Commun. 2020. PMID: 32958763 Free PMC article.
117 results