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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1994 2
1995 4
1996 4
1997 1
2001 1
2002 1
2003 1
2004 1
2005 1
2006 2
2007 3
2008 1
2009 1
2010 5
2011 4
2012 2
2013 1
2014 2
2020 0
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Search Results

34 results
Results by year
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Page 1
Prediction of function in DNA sequence analysis.
Gelfand MS. Gelfand MS. J Comput Biol. 1995 Spring;2(1):87-115. doi: 10.1089/cmb.1995.2.87. J Comput Biol. 1995. PMID: 7497122 Review.
New genes in old sequence: a strategy for finding genes in the bacterial genome.
Borodovsky M, Koonin EV, Rudd KE. Borodovsky M, et al. Trends Biochem Sci. 1994 Aug;19(8):309-13. doi: 10.1016/0968-0004(94)90067-1. Trends Biochem Sci. 1994. PMID: 7940673 Review. No abstract available.
Frameshift detection in prokaryotic genomic sequences.
Kislyuk A, Lomsadze A, Lapidus AL, Borodovsky M. Kislyuk A, et al. Int J Bioinform Res Appl. 2009;5(4):458-77. doi: 10.1504/IJBRA.2009.027519. Int J Bioinform Res Appl. 2009. PMID: 19640832
MetaGeneTack: ab initio detection of frameshifts in metagenomic sequences.
Tang S, Antonov I, Borodovsky M. Tang S, et al. Bioinformatics. 2013 Jan 1;29(1):114-6. doi: 10.1093/bioinformatics/bts636. Epub 2012 Nov 4. Bioinformatics. 2013. PMID: 23129300 Free PMC article.
Eukaryotic gene prediction using GeneMark.hmm-E and GeneMark-ES.
Borodovsky M, Lomsadze A. Borodovsky M, et al. Curr Protoc Bioinformatics. 2011 Sep;Chapter 4:Unit 4.6.1-10. doi: 10.1002/0471250953.bi0406s35. Curr Protoc Bioinformatics. 2011. PMID: 21901742 Free PMC article.
Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication.
Wu GA, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J, Takita MA, Labadie K, Poulain J, Couloux A, Jabbari K, Cattonaro F, Del Fabbro C, Pinosio S, Zuccolo A, Chapman J, Grimwood J, Tadeo FR, Estornell LH, Muñoz-Sanz JV, Ibanez V, Herrero-Ortega A, Aleza P, Pérez-Pérez J, Ramón D, Brunel D, Luro F, Chen C, Farmerie WG, Desany B, Kodira C, Mohiuddin M, Harkins T, Fredrikson K, Burns P, Lomsadze A, Borodovsky M, Reforgiato G, Freitas-Astúa J, Quetier F, Navarro L, Roose M, Wincker P, Schmutz J, Morgante M, Machado MA, Talon M, Jaillon O, Ollitrault P, Gmitter F, Rokhsar D. Wu GA, et al. Nat Biotechnol. 2014 Jul;32(7):656-62. doi: 10.1038/nbt.2906. Epub 2014 Jun 8. Nat Biotechnol. 2014. PMID: 24908277 Free PMC article.
The genome of woodland strawberry (Fragaria vesca).
Shulaev V, Sargent DJ, Crowhurst RN, Mockler TC, Folkerts O, Delcher AL, Jaiswal P, Mockaitis K, Liston A, Mane SP, Burns P, Davis TM, Slovin JP, Bassil N, Hellens RP, Evans C, Harkins T, Kodira C, Desany B, Crasta OR, Jensen RV, Allan AC, Michael TP, Setubal JC, Celton JM, Rees DJ, Williams KP, Holt SH, Ruiz Rojas JJ, Chatterjee M, Liu B, Silva H, Meisel L, Adato A, Filichkin SA, Troggio M, Viola R, Ashman TL, Wang H, Dharmawardhana P, Elser J, Raja R, Priest HD, Bryant DW Jr, Fox SE, Givan SA, Wilhelm LJ, Naithani S, Christoffels A, Salama DY, Carter J, Lopez Girona E, Zdepski A, Wang W, Kerstetter RA, Schwab W, Korban SS, Davik J, Monfort A, Denoyes-Rothan B, Arus P, Mittler R, Flinn B, Aharoni A, Bennetzen JL, Salzberg SL, Dickerman AW, Velasco R, Borodovsky M, Veilleux RE, Folta KM. Shulaev V, et al. Nat Genet. 2011 Feb;43(2):109-16. doi: 10.1038/ng.740. Epub 2010 Dec 26. Nat Genet. 2011. PMID: 21186353 Free PMC article.
The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation.
Blanc G, Agarkova I, Grimwood J, Kuo A, Brueggeman A, Dunigan DD, Gurnon J, Ladunga I, Lindquist E, Lucas S, Pangilinan J, Pröschold T, Salamov A, Schmutz J, Weeks D, Yamada T, Lomsadze A, Borodovsky M, Claverie JM, Grigoriev IV, Van Etten JL. Blanc G, et al. Genome Biol. 2012 May 25;13(5):R39. doi: 10.1186/gb-2012-13-5-r39. Genome Biol. 2012. PMID: 22630137 Free PMC article.
Ab initio gene identification in metagenomic sequences.
Zhu W, Lomsadze A, Borodovsky M. Zhu W, et al. Nucleic Acids Res. 2010 Jul;38(12):e132. doi: 10.1093/nar/gkq275. Epub 2010 Apr 19. Nucleic Acids Res. 2010. PMID: 20403810 Free PMC article.
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