Habermann BH - Search Results

1

Designing efficient and specific endoribonuclease-prepared siRNAs.

Surendranath V, Theis M, Habermann BH, Buchholz F. Surendranath V, et al. Among authors: habermann bh. Methods Mol Biol. 2013;942:193-204. doi: 10.1007/978-1-62703-119-6_11. Methods Mol Biol. 2013. PMID: 23027053

2

An endoribonuclease-prepared siRNA screen in human cells identifies genes essential for cell division.

Kittler R, Putz G, Pelletier L, Poser I, Heninger AK, Drechsel D, Fischer S, Konstantinova I, Habermann B, Grabner H, Yaspo ML, Himmelbauer H, Korn B, Neugebauer K, Pisabarro MT, Buchholz F. Kittler R, et al. Nature. 2004 Dec 23;432(7020):1036-40. doi: 10.1038/nature03159. Nature. 2004. PMID: 15616564

3

Genome-wide resources of endoribonuclease-prepared short interfering RNAs for specific loss-of-function studies.

Kittler R, Surendranath V, Heninger AK, Slabicki M, Theis M, Putz G, Franke K, Caldarelli A, Grabner H, Kozak K, Wagner J, Rees E, Korn B, Frenzel C, Sachse C, Sönnichsen B, Guo J, Schelter J, Burchard J, Linsley PS, Jackson AL, Habermann B, Buchholz F. Kittler R, et al. Nat Methods. 2007 Apr;4(4):337-44. doi: 10.1038/nmeth1025. Epub 2007 Mar 11. Nat Methods. 2007. PMID: 17351622

4

Genome-scale RNAi profiling of cell division in human tissue culture cells.

Kittler R, Pelletier L, Heninger AK, Slabicki M, Theis M, Miroslaw L, Poser I, Lawo S, Grabner H, Kozak K, Wagner J, Surendranath V, Richter C, Bowen W, Jackson AL, Habermann B, Hyman AA, Buchholz F. Kittler R, et al. Nat Cell Biol. 2007 Dec;9(12):1401-12. doi: 10.1038/ncb1659. Epub 2007 Nov 11. Nat Cell Biol. 2007. PMID: 17994010

5

Production of endoribonuclease-prepared short interfering RNAs for gene silencing in mammalian cells.

Kittler R, Heninger AK, Franke K, Habermann B, Buchholz F. Kittler R, et al. Nat Methods. 2005 Oct;2(10):779-84. doi: 10.1038/nmeth1005-779. Nat Methods. 2005. PMID: 16179925 No abstract available.

6

DEQOR: a web-based tool for the design and quality control of siRNAs.

Henschel A, Buchholz F, Habermann B. Henschel A, et al. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W113-20. doi: 10.1093/nar/gkh408. Nucleic Acids Res. 2004. PMID: 15215362 Free PMC article.

7

ProFAT: a web-based tool for the functional annotation of protein sequences.

Bradshaw CR, Surendranath V, Habermann B. Bradshaw CR, et al. BMC Bioinformatics. 2006 Oct 23;7:466. doi: 10.1186/1471-2105-7-466. BMC Bioinformatics. 2006. PMID: 17059594 Free PMC article.

8

HMMerThread: detecting remote, functional conserved domains in entire genomes by combining relaxed sequence-database searches with fold recognition.

Bradshaw CR, Surendranath V, Henschel R, Mueller MS, Habermann BH. Bradshaw CR, et al. Among authors: habermann bh. PLoS One. 2011 Mar 10;6(3):e17568. doi: 10.1371/journal.pone.0017568. PLoS One. 2011. PMID: 21423752 Free PMC article.

9

SeLOX--a locus of recombination site search tool for the detection and directed evolution of site-specific recombination systems.

Surendranath V, Chusainow J, Hauber J, Buchholz F, Habermann BH. Surendranath V, et al. Among authors: habermann bh. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W293-8. doi: 10.1093/nar/gkq523. Epub 2010 Jun 6. Nucleic Acids Res. 2010. PMID: 20529878 Free PMC article.

10

morFeus: a web-based program to detect remotely conserved orthologs using symmetrical best hits and orthology network scoring.

Wagner I, Volkmer M, Sharan M, Villaveces JM, Oswald F, Surendranath V, Habermann BH. Wagner I, et al. Among authors: habermann bh. BMC Bioinformatics. 2014 Aug 6;15(1):263. doi: 10.1186/1471-2105-15-263. BMC Bioinformatics. 2014. PMID: 25096057 Free PMC article.

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