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Variation in the Intensity of Selection on Codon Bias over Time Causes Contrasting Patterns of Base Composition Evolution in Drosophila.
Jackson BC, Campos JL, Haddrill PR, Charlesworth B, Zeng K. Jackson BC, et al. Among authors: haddrill pr. Genome Biol Evol. 2017 Jan 1;9(1):102-123. doi: 10.1093/gbe/evw291. Genome Biol Evol. 2017. PMID: 28082609 Free PMC article.
The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogaster.
Webster CL, Waldron FM, Robertson S, Crowson D, Ferrari G, Quintana JF, Brouqui JM, Bayne EH, Longdon B, Buck AH, Lazzaro BP, Akorli J, Haddrill PR, Obbard DJ. Webster CL, et al. Among authors: haddrill pr. PLoS Biol. 2015 Jul 14;13(7):e1002210. doi: 10.1371/journal.pbio.1002210. eCollection 2015 Jul. PLoS Biol. 2015. PMID: 26172158 Free PMC article.
The relation between recombination rate and patterns of molecular evolution and variation in Drosophila melanogaster.
Campos JL, Halligan DL, Haddrill PR, Charlesworth B. Campos JL, et al. Among authors: haddrill pr. Mol Biol Evol. 2014 Apr;31(4):1010-28. doi: 10.1093/molbev/msu056. Epub 2014 Jan 30. Mol Biol Evol. 2014. PMID: 24489114 Free PMC article.
Estimation of the spontaneous mutation rate per nucleotide site in a Drosophila melanogaster full-sib family.
Keightley PD, Ness RW, Halligan DL, Haddrill PR. Keightley PD, et al. Among authors: haddrill pr. Genetics. 2014 Jan;196(1):313-20. doi: 10.1534/genetics.113.158758. Epub 2013 Nov 8. Genetics. 2014. PMID: 24214343 Free PMC article.
Codon usage bias and effective population sizes on the X chromosome versus the autosomes in Drosophila melanogaster.
Campos JL, Zeng K, Parker DJ, Charlesworth B, Haddrill PR. Campos JL, et al. Mol Biol Evol. 2013 Apr;30(4):811-23. doi: 10.1093/molbev/mss222. Epub 2012 Nov 29. Mol Biol Evol. 2013. PMID: 23204387 Free PMC article.
Molecular evolution in nonrecombining regions of the Drosophila melanogaster genome.
Campos JL, Charlesworth B, Haddrill PR. Campos JL, et al. Genome Biol Evol. 2012;4(3):278-88. doi: 10.1093/gbe/evs010. Epub 2012 Jan 23. Genome Biol Evol. 2012. PMID: 22275518 Free PMC article.
Ancestral polymorphisms in Drosophila pseudoobscura and Drosophila miranda.
Nowell RW, Charlesworth B, Haddrill PR. Nowell RW, et al. Genet Res (Camb). 2011 Aug;93(4):255-63. doi: 10.1017/S0016672311000206. Epub 2011 Jul 18. Genet Res (Camb). 2011. PMID: 21767458
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