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A prebiotic basis for ATP as the universal energy currency.
Pinna S, Kunz C, Halpern A, Harrison SA, Jordan SF, Ward J, Werner F, Lane N. Pinna S, et al. Among authors: halpern a. PLoS Biol. 2022 Oct 4;20(10):e3001437. doi: 10.1371/journal.pbio.3001437. eCollection 2022 Oct. PLoS Biol. 2022. PMID: 36194581 Free PMC article.
A biophysical basis for the emergence of the genetic code in protocells.
Harrison SA, Palmeira RN, Halpern A, Lane N. Harrison SA, et al. Among authors: halpern a. Biochim Biophys Acta Bioenerg. 2022 Nov 1;1863(8):148597. doi: 10.1016/j.bbabio.2022.148597. Epub 2022 Jul 19. Biochim Biophys Acta Bioenerg. 2022. PMID: 35868450 Free article.
Evolution of genes and genomes on the Drosophila phylogeny.
Drosophila 12 Genomes Consortium; Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artieri CG, Barbash DA, Barker D, Barsanti P, Batterham P, Batzoglou S, Begun D, Bhutkar A, Blanco E, Bosak SA, Bradley RK, Brand AD, Brent MR, Brooks AN, Brown RH, Butlin RK, Caggese C, Calvi BR, Bernardo de Carvalho A, Caspi A, Castrezana S, Celniker SE, Chang JL, Chapple C, Chatterji S, Chinwalla A, Civetta A, Clifton SW, Comeron JM, Costello JC, Coyne JA, Daub J, David RG, Delcher AL, Delehaunty K, Do CB, Ebling H, Edwards K, Eickbush T, Evans JD, Filipski A, Findeiss S, Freyhult E, Fulton L, Fulton R, Garcia AC, Gardiner A, Garfield DA, Garvin BE, Gibson G, Gilbert D, Gnerre S, Godfrey J, Good R, Gotea V, Gravely B, Greenberg AJ, Griffiths-Jones S, Gross S, Guigo R, Gustafson EA, Haerty W, Hahn MW, Halligan DL, Halpern AL, Halter GM, Han MV, Heger A, Hillier L, Hinrichs AS, Holmes I, Hoskins RA, Hubisz MJ, Hultmark D, Huntley MA, Jaffe DB, Jagadeeshan S, Jeck WR, Johnson J, Jones CD, Jordan… See abstract for full author list ➔ Drosophila 12 Genomes Consortium, et al. Among authors: halpern al. Nature. 2007 Nov 8;450(7167):203-18. doi: 10.1038/nature06341. Nature. 2007. PMID: 17994087
Strelka2: fast and accurate calling of germline and somatic variants.
Kim S, Scheffler K, Halpern AL, Bekritsky MA, Noh E, Källberg M, Chen X, Kim Y, Beyter D, Krusche P, Saunders CT. Kim S, et al. Among authors: halpern al. Nat Methods. 2018 Aug;15(8):591-594. doi: 10.1038/s41592-018-0051-x. Epub 2018 Jul 16. Nat Methods. 2018. PMID: 30013048
The dog genome: survey sequencing and comparative analysis.
Kirkness EF, Bafna V, Halpern AL, Levy S, Remington K, Rusch DB, Delcher AL, Pop M, Wang W, Fraser CM, Venter JC. Kirkness EF, et al. Science. 2003 Sep 26;301(5641):1898-903. doi: 10.1126/science.1086432. Science. 2003. PMID: 14512627
Ancient noncoding elements conserved in the human genome.
Venkatesh B, Kirkness EF, Loh YH, Halpern AL, Lee AP, Johnson J, Dandona N, Viswanathan LD, Tay A, Venter JC, Strausberg RL, Brenner S. Venkatesh B, et al. Among authors: halpern al. Science. 2006 Dec 22;314(5807):1892. doi: 10.1126/science.1130708. Science. 2006. PMID: 17185593
Massive parallelism, randomness and genomic advances.
Venter JC, Levy S, Stockwell T, Remington K, Halpern A. Venter JC, et al. Among authors: halpern a. Nat Genet. 2003 Mar;33 Suppl:219-27. doi: 10.1038/ng1114. Nat Genet. 2003. PMID: 12610531 Review.
876 results