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GenMAPP 2: new features and resources for pathway analysis.
Salomonis N, Hanspers K, Zambon AC, Vranizan K, Lawlor SC, Dahlquist KD, Doniger SW, Stuart J, Conklin BR, Pico AR. Salomonis N, et al. Among authors: hanspers k. BMC Bioinformatics. 2007 Jun 24;8:217. doi: 10.1186/1471-2105-8-217. BMC Bioinformatics. 2007. PMID: 17588266 Free PMC article.
Integration of biological networks and gene expression data using Cytoscape.
Cline MS, Smoot M, Cerami E, Kuchinsky A, Landys N, Workman C, Christmas R, Avila-Campilo I, Creech M, Gross B, Hanspers K, Isserlin R, Kelley R, Killcoyne S, Lotia S, Maere S, Morris J, Ono K, Pavlovic V, Pico AR, Vailaya A, Wang PL, Adler A, Conklin BR, Hood L, Kuiper M, Sander C, Schmulevich I, Schwikowski B, Warner GJ, Ideker T, Bader GD. Cline MS, et al. Among authors: hanspers k. Nat Protoc. 2007;2(10):2366-82. doi: 10.1038/nprot.2007.324. Nat Protoc. 2007. PMID: 17947979 Free PMC article.
WikiPathways: pathway editing for the people.
Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, Evelo C. Pico AR, et al. Among authors: hanspers k. PLoS Biol. 2008 Jul 22;6(7):e184. doi: 10.1371/journal.pbio.0060184. PLoS Biol. 2008. PMID: 18651794 Free PMC article.
Presenting and exploring biological pathways with PathVisio.
van Iersel MP, Kelder T, Pico AR, Hanspers K, Coort S, Conklin BR, Evelo C. van Iersel MP, et al. Among authors: hanspers k. BMC Bioinformatics. 2008 Sep 25;9:399. doi: 10.1186/1471-2105-9-399. BMC Bioinformatics. 2008. PMID: 18817533 Free PMC article.
Mining biological pathways using WikiPathways web services.
Kelder T, Pico AR, Hanspers K, van Iersel MP, Evelo C, Conklin BR. Kelder T, et al. Among authors: hanspers k. PLoS One. 2009 Jul 30;4(7):e6447. doi: 10.1371/journal.pone.0006447. PLoS One. 2009. PMID: 19649250 Free PMC article.
WikiPathways: building research communities on biological pathways.
Kelder T, van Iersel MP, Hanspers K, Kutmon M, Conklin BR, Evelo CT, Pico AR. Kelder T, et al. Among authors: hanspers k. Nucleic Acids Res. 2012 Jan;40(Database issue):D1301-7. doi: 10.1093/nar/gkr1074. Epub 2011 Nov 16. Nucleic Acids Res. 2012. PMID: 22096230 Free PMC article.
Mosaic: making biological sense of complex networks.
Zhang C, Hanspers K, Kuchinsky A, Salomonis N, Xu D, Pico AR. Zhang C, et al. Among authors: hanspers k. Bioinformatics. 2012 Jul 15;28(14):1943-4. doi: 10.1093/bioinformatics/bts278. Epub 2012 May 9. Bioinformatics. 2012. PMID: 22576176 Free PMC article.
40 results