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Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities.
Berger MF, Philippakis AA, Qureshi AM, He FS, Estep PW 3rd, Bulyk ML. Berger MF, et al. Among authors: he fs. Nat Biotechnol. 2006 Nov;24(11):1429-35. doi: 10.1038/nbt1246. Epub 2006 Sep 24. Nat Biotechnol. 2006. PMID: 16998473 Free PMC article.
Systematic identification of mammalian regulatory motifs' target genes and functions.
Warner JB, Philippakis AA, Jaeger SA, He FS, Lin J, Bulyk ML. Warner JB, et al. Among authors: he fs. Nat Methods. 2008 Apr;5(4):347-53. doi: 10.1038/nmeth.1188. Epub 2008 Mar 2. Nat Methods. 2008. PMID: 18311145 Free PMC article.
Modulefinder: a tool for computational discovery of cis regulatory modules.
Philippakis AA, He FS, Bulyk ML. Philippakis AA, et al. Among authors: he fs. Pac Symp Biocomput. 2005:519-30. Pac Symp Biocomput. 2005. PMID: 15759656 Free PMC article.
Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cells.
Philippakis AA, Busser BW, Gisselbrecht SS, He FS, Estrada B, Michelson AM, Bulyk ML. Philippakis AA, et al. Among authors: he fs. PLoS Comput Biol. 2006 May;2(5):e53. doi: 10.1371/journal.pcbi.0020053. Epub 2006 May 26. PLoS Comput Biol. 2006. PMID: 16733548 Free PMC article.
Shotgun metagenomics reveals both taxonomic and tryptophan pathway differences of gut microbiota in bipolar disorder with current major depressive episode patients.
Lai WT, Zhao J, Xu SX, Deng WF, Xu D, Wang MB, He FS, Liu YH, Guo YY, Ye SW, Yang QF, Zhang YL, Wang S, Li MZ, Yang YJ, Liu TB, Tan ZM, Xie XH, Rong H. Lai WT, et al. Among authors: he fs. J Affect Disord. 2021 Jan 1;278:311-319. doi: 10.1016/j.jad.2020.09.010. Epub 2020 Sep 8. J Affect Disord. 2021. PMID: 32979562
Photoredox-catalyzed sulfonylation of difluoroenoxysilanes with the insertion of sulfur dioxide.
He FS, Yao Y, Xie W, Wu J. He FS, et al. Chem Commun (Camb). 2020 Aug 19;56(66):9469-9472. doi: 10.1039/d0cc03591b. Chem Commun (Camb). 2020. PMID: 32812540
A copper-catalyzed insertion of sulfur dioxide via radical coupling.
Zhang J, Yang M, Liu JB, He FS, Wu J. Zhang J, et al. Among authors: he fs. Chem Commun (Camb). 2020 Mar 12;56(21):3225-3228. doi: 10.1039/d0cc00375a. Chem Commun (Camb). 2020. PMID: 32073056
Shotgun metagenomics reveals both taxonomic and tryptophan pathway differences of gut microbiota in major depressive disorder patients.
Lai WT, Deng WF, Xu SX, Zhao J, Xu D, Liu YH, Guo YY, Wang MB, He FS, Ye SW, Yang QF, Liu TB, Zhang YL, Wang S, Li MZ, Yang YJ, Xie XH, Rong H. Lai WT, et al. Among authors: he fs. Psychol Med. 2019 Nov 5:1-12. doi: 10.1017/S0033291719003027. Online ahead of print. Psychol Med. 2019. PMID: 31685046
Direct C-H Methylsulfonylation of Alkenes with the Insertion of Sulfur Dioxide.
He FS, Gong X, Rojsitthisak P, Wu J. He FS, et al. J Org Chem. 2019 Oct 18;84(20):13159-13163. doi: 10.1021/acs.joc.9b01729. Epub 2019 Sep 12. J Org Chem. 2019. PMID: 31512476
Similarly in depression, nuances of gut microbiota: Evidences from a shotgun metagenomics sequencing study on major depressive disorder versus bipolar disorder with current major depressive episode patients.
Rong H, Xie XH, Zhao J, Lai WT, Wang MB, Xu D, Liu YH, Guo YY, Xu SX, Deng WF, Yang QF, Xiao L, Zhang YL, He FS, Wang S, Liu TB. Rong H, et al. Among authors: he fs. J Psychiatr Res. 2019 Jun;113:90-99. doi: 10.1016/j.jpsychires.2019.03.017. Epub 2019 Mar 21. J Psychiatr Res. 2019. PMID: 30927646
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