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Emergence and global spread of epidemic healthcare-associated Clostridium difficile.
He M, Miyajima F, Roberts P, Ellison L, Pickard DJ, Martin MJ, Connor TR, Harris SR, Fairley D, Bamford KB, D'Arc S, Brazier J, Brown D, Coia JE, Douce G, Gerding D, Kim HJ, Koh TH, Kato H, Senoh M, Louie T, Michell S, Butt E, Peacock SJ, Brown NM, Riley T, Songer G, Wilcox M, Pirmohamed M, Kuijper E, Hawkey P, Wren BW, Dougan G, Parkhill J, Lawley TD. He M, et al. Nat Genet. 2013 Jan;45(1):109-13. doi: 10.1038/ng.2478. Epub 2012 Dec 9. Nat Genet. 2013. PMID: 23222960 Free PMC article.
Evolutionary dynamics of Clostridium difficile over short and long time scales.
He M, Sebaihia M, Lawley TD, Stabler RA, Dawson LF, Martin MJ, Holt KE, Seth-Smith HM, Quail MA, Rance R, Brooks K, Churcher C, Harris D, Bentley SD, Burrows C, Clark L, Corton C, Murray V, Rose G, Thurston S, van Tonder A, Walker D, Wren BW, Dougan G, Parkhill J. He M, et al. Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7527-32. doi: 10.1073/pnas.0914322107. Epub 2010 Apr 5. Proc Natl Acad Sci U S A. 2010. PMID: 20368420 Free PMC article.
Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium.
Stabler RA, He M, Dawson L, Martin M, Valiente E, Corton C, Lawley TD, Sebaihia M, Quail MA, Rose G, Gerding DN, Gibert M, Popoff MR, Parkhill J, Dougan G, Wren BW. Stabler RA, et al. Among authors: he m. Genome Biol. 2009;10(9):R102. doi: 10.1186/gb-2009-10-9-r102. Epub 2009 Sep 25. Genome Biol. 2009. PMID: 19781061 Free PMC article.
A simple method for directional transcriptome sequencing using Illumina technology.
Croucher NJ, Fookes MC, Perkins TT, Turner DJ, Marguerat SB, Keane T, Quail MA, He M, Assefa S, Bähler J, Kingsley RA, Parkhill J, Bentley SD, Dougan G, Thomson NR. Croucher NJ, et al. Among authors: he m. Nucleic Acids Res. 2009 Dec;37(22):e148. doi: 10.1093/nar/gkp811. Nucleic Acids Res. 2009. PMID: 19815668 Free PMC article.
Geographical affinities of the HapMap samples.
He M, Gitschier J, Zerjal T, de Knijff P, Tyler-Smith C, Xue Y. He M, et al. PLoS One. 2009;4(3):e4684. doi: 10.1371/journal.pone.0004684. Epub 2009 Mar 4. PLoS One. 2009. PMID: 19259268 Free PMC article.
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