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Publication Committee meeting. HUPO 5th annual World Congress. Long Beach, CA, USA 30 October 2006.

Orchard S, Heck A, Uhlen M, Ping P. Orchard S, et al. Among authors: heck a. Proteomics. 2007 Apr;7(7):1009-11. doi: 10.1002/pmic.200700015. Proteomics. 2007. PMID: 17340644

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The minimum information about a proteomics experiment (MIAPE).

Taylor CF, Paton NW, Lilley KS, Binz PA, Julian RK Jr, Jones AR, Zhu W, Apweiler R, Aebersold R, Deutsch EW, Dunn MJ, Heck AJ, Leitner A, Macht M, Mann M, Martens L, Neubert TA, Patterson SD, Ping P, Seymour SL, Souda P, Tsugita A, Vandekerckhove J, Vondriska TM, Whitelegge JP, Wilkins MR, Xenarios I, Yates JR 3rd, Hermjakob H. Taylor CF, et al. Among authors: heck aj. Nat Biotechnol. 2007 Aug;25(8):887-93. doi: 10.1038/nbt1329. Nat Biotechnol. 2007. PMID: 17687369 Review.

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Assessment of SRM, MRM(3) , and DIA for the targeted analysis of phosphorylation dynamics in non-small cell lung cancer.

Schmidlin T, Garrigues L, Lane CS, Mulder TC, van Doorn S, Post H, de Graaf EL, Lemeer S, Heck AJ, Altelaar AF. Schmidlin T, et al. Among authors: heck aj. Proteomics. 2016 Aug;16(15-16):2193-205. doi: 10.1002/pmic.201500453. Epub 2016 Jun 27. Proteomics. 2016. PMID: 27219855

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Comparative proteome analysis to explore p53 pathway disruption in head and neck carcinogenesis.

Schaaij-Visser TB, Brakenhoff RH, Jansen JW, O'Flaherty MC, Smeets SJ, Heck AJ, Slijper M. Schaaij-Visser TB, et al. Among authors: heck aj. J Proteomics. 2009 Jul 21;72(5):803-14. doi: 10.1016/j.jprot.2009.05.001. Epub 2009 May 13. J Proteomics. 2009. PMID: 19446051

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A practical guide for the identification of membrane and plasma membrane proteins in human embryonic stem cells and human embryonal carcinoma cells.

Dormeyer W, van Hoof D, Mummery CL, Krijgsveld J, Heck AJ. Dormeyer W, et al. Proteomics. 2008 Oct;8(19):4036-53. doi: 10.1002/pmic.200800143. Proteomics. 2008. PMID: 18763709 Review.

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The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium.

Côté RG, Griss J, Dianes JA, Wang R, Wright JC, van den Toorn HW, van Breukelen B, Heck AJ, Hulstaert N, Martens L, Reisinger F, Csordas A, Ovelleiro D, Perez-Rivevol Y, Barsnes H, Hermjakob H, Vizcaíno JA. Côté RG, et al. Among authors: heck aj. Mol Cell Proteomics. 2012 Dec;11(12):1682-9. doi: 10.1074/mcp.O112.021543. Epub 2012 Sep 4. Mol Cell Proteomics. 2012. PMID: 22949509 Free PMC article.

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Analytical utility of mass spectral binning in proteomic experiments by SPectral Immonium Ion Detection (SPIID).

Kelstrup CD, Frese C, Heck AJ, Olsen JV, Nielsen ML. Kelstrup CD, et al. Mol Cell Proteomics. 2014 Aug;13(8):1914-24. doi: 10.1074/mcp.O113.035915. Epub 2014 Jun 3. Mol Cell Proteomics. 2014. PMID: 24895383 Free PMC article.

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qcML: an exchange format for quality control metrics from mass spectrometry experiments.

Walzer M, Pernas LE, Nasso S, Bittremieux W, Nahnsen S, Kelchtermans P, Pichler P, van den Toorn HW, Staes A, Vandenbussche J, Mazanek M, Taus T, Scheltema RA, Kelstrup CD, Gatto L, van Breukelen B, Aiche S, Valkenborg D, Laukens K, Lilley KS, Olsen JV, Heck AJ, Mechtler K, Aebersold R, Gevaert K, Vizcaíno JA, Hermjakob H, Kohlbacher O, Martens L. Walzer M, et al. Among authors: heck aj. Mol Cell Proteomics. 2014 Aug;13(8):1905-13. doi: 10.1074/mcp.M113.035907. Epub 2014 Apr 23. Mol Cell Proteomics. 2014. PMID: 24760958 Free PMC article.

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Finding the same needles in the haystack? A comparison of phosphotyrosine peptides enriched by immuno-affinity precipitation and metal-based affinity chromatography.

Di Palma S, Zoumaro-Djayoon A, Peng M, Post H, Preisinger C, Munoz J, Heck AJ. Di Palma S, et al. Among authors: heck aj. J Proteomics. 2013 Oct 8;91:331-7. doi: 10.1016/j.jprot.2013.07.024. Epub 2013 Aug 3. J Proteomics. 2013. PMID: 23917254

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Recent advances in peptide separation by multidimensional liquid chromatography for proteome analysis.

Di Palma S, Hennrich ML, Heck AJ, Mohammed S. Di Palma S, et al. J Proteomics. 2012 Jul 16;75(13):3791-813. doi: 10.1016/j.jprot.2012.04.033. Epub 2012 May 4. J Proteomics. 2012. PMID: 22561838 Review.

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