Heermann DW - Search Results

1

Elucidation of the Clustered Nano-Architecture of Radiation-Induced DNA Damage Sites and Surrounding Chromatin in Cancer Cells: A Single Molecule Localization Microscopy Approach.

Hausmann M, Falk M, Neitzel C, Hofmann A, Biswas A, Gier T, Falkova I, Heermann DW, Hildenbrand G. Hausmann M, et al. Int J Mol Sci. 2021 Mar 31;22(7):3636. doi: 10.3390/ijms22073636. Int J Mol Sci. 2021. PMID: 33807337 Free PMC article.

2

Localization microscopy reveals expression-dependent parameters of chromatin nanostructure.

Bohn M, Diesinger P, Kaufmann R, Weiland Y, Müller P, Gunkel M, von Ketteler A, Lemmer P, Hausmann M, Heermann DW, Cremer C. Bohn M, et al. Biophys J. 2010 Sep 8;99(5):1358-67. doi: 10.1016/j.bpj.2010.05.043. Biophys J. 2010. PMID: 20816047 Free PMC article.

3

Zinc finger proteins and the 3D organization of chromosomes.

Feinauer CJ, Hofmann A, Goldt S, Liu L, Máté G, Heermann DW. Feinauer CJ, et al. Adv Protein Chem Struct Biol. 2013;90:67-117. doi: 10.1016/B978-0-12-410523-2.00003-1. Adv Protein Chem Struct Biol. 2013. PMID: 23582202

4

DNA double-strand breaks: linking gene expression to chromosome morphology and mobility.

Zhang Y, Heermann DW. Zhang Y, et al. Chromosoma. 2014 Mar;123(1-2):103-15. doi: 10.1007/s00412-013-0432-y. Epub 2013 Aug 28. Chromosoma. 2014. PMID: 23982751

5

A topological similarity measure for proteins.

Máté G, Hofmann A, Wenzel N, Heermann DW. Máté G, et al. Biochim Biophys Acta. 2014 Apr;1838(4):1180-90. doi: 10.1016/j.bbamem.2013.08.019. Epub 2013 Sep 10. Biochim Biophys Acta. 2014. PMID: 24036226 Free article.

6

The role of loops on the order of eukaryotes and prokaryotes.

Hofmann A, Heermann DW. Hofmann A, et al. FEBS Lett. 2015 Oct 7;589(20 Pt A):2958-65. doi: 10.1016/j.febslet.2015.04.021. Epub 2015 Apr 23. FEBS Lett. 2015. PMID: 25912650 Review.

7

Radiation induced chromatin conformation changes analysed by fluorescent localization microscopy, statistical physics, and graph theory.

Zhang Y, Máté G, Müller P, Hillebrandt S, Krufczik M, Bach M, Kaufmann R, Hausmann M, Heermann DW. Zhang Y, et al. PLoS One. 2015 Jun 4;10(6):e0128555. doi: 10.1371/journal.pone.0128555. eCollection 2015. PLoS One. 2015. PMID: 26042422 Free PMC article.

8

Using Persistent Homology as a New Approach for Super-Resolution Localization Microscopy Data Analysis and Classification of γH2AX Foci/Clusters.

Hofmann A, Krufczik M, Heermann DW, Hausmann M. Hofmann A, et al. Int J Mol Sci. 2018 Aug 2;19(8):2263. doi: 10.3390/ijms19082263. Int J Mol Sci. 2018. PMID: 30072594 Free PMC article.

9

Processing and Analysis of Hi-C Data on Bacteria.

Hofmann A, Heermann DW. Hofmann A, et al. Methods Mol Biol. 2018;1837:19-31. doi: 10.1007/978-1-4939-8675-0_2. Methods Mol Biol. 2018. PMID: 30109603 Review.

10

Deciphering 3D Organization of Chromosomes Using Hi-C Data.

Hofmann A, Heermann DW. Hofmann A, et al. Methods Mol Biol. 2018;1837:389-401. doi: 10.1007/978-1-4939-8675-0_19. Methods Mol Biol. 2018. PMID: 30109620

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