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Amino acid substitution matrices from protein blocks.
Henikoff S, Henikoff JG. Henikoff S, et al. Among authors: henikoff jg. Proc Natl Acad Sci U S A. 1992 Nov 15;89(22):10915-9. doi: 10.1073/pnas.89.22.10915. Proc Natl Acad Sci U S A. 1992. PMID: 1438297 Free PMC article.
Automated assembly of protein blocks for database searching.
Henikoff S, Henikoff JG. Henikoff S, et al. Among authors: henikoff jg. Nucleic Acids Res. 1991 Dec 11;19(23):6565-72. doi: 10.1093/nar/19.23.6565. Nucleic Acids Res. 1991. PMID: 1754394 Free PMC article.
Position-based sequence weights.
Henikoff S, Henikoff JG. Henikoff S, et al. Among authors: henikoff jg. J Mol Biol. 1994 Nov 4;243(4):574-8. doi: 10.1016/0022-2836(94)90032-9. J Mol Biol. 1994. PMID: 7966282
Protein family classification based on searching a database of blocks.
Henikoff S, Henikoff JG. Henikoff S, et al. Among authors: henikoff jg. Genomics. 1994 Jan 1;19(1):97-107. doi: 10.1006/geno.1994.1018. Genomics. 1994. PMID: 8188249
Performance evaluation of amino acid substitution matrices.
Henikoff S, Henikoff JG. Henikoff S, et al. Among authors: henikoff jg. Proteins. 1993 Sep;17(1):49-61. doi: 10.1002/prot.340170108. Proteins. 1993. PMID: 8234244
The Blocks database--a system for protein classification.
Pietrokovski S, Henikoff JG, Henikoff S. Pietrokovski S, et al. Among authors: henikoff jg, henikoff s. Nucleic Acids Res. 1996 Jan 1;24(1):197-200. doi: 10.1093/nar/24.1.197. Nucleic Acids Res. 1996. PMID: 8594578 Free PMC article.
Blocks database and its applications.
Henikoff JG, Henikoff S. Henikoff JG, et al. Among authors: henikoff s. Methods Enzymol. 1996;266:88-105. doi: 10.1016/s0076-6879(96)66008-x. Methods Enzymol. 1996. PMID: 8743679
Using substitution probabilities to improve position-specific scoring matrices.
Henikoff JG, Henikoff S. Henikoff JG, et al. Among authors: henikoff s. Comput Appl Biosci. 1996 Apr;12(2):135-43. doi: 10.1093/bioinformatics/12.2.135. Comput Appl Biosci. 1996. PMID: 8744776
Recent enhancements to the Blocks Database servers.
Henikoff JG, Pietrokovski S, Henikoff S. Henikoff JG, et al. Among authors: henikoff s. Nucleic Acids Res. 1997 Jan 1;25(1):222-5. doi: 10.1093/nar/25.1.222. Nucleic Acids Res. 1997. PMID: 9016540 Free PMC article.
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