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51 results
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Inference of macromolecular assemblies from crystalline state.
Krissinel E, Henrick K. Krissinel E, et al. Among authors: henrick k. J Mol Biol. 2007 Sep 21;372(3):774-97. doi: 10.1016/j.jmb.2007.05.022. Epub 2007 May 13. J Mol Biol. 2007. PMID: 17681537
MSDsite: a database search and retrieval system for the analysis and viewing of bound ligands and active sites.
Golovin A, Dimitropoulos D, Oldfield T, Rachedi A, Henrick K. Golovin A, et al. Among authors: henrick k. Proteins. 2005 Jan 1;58(1):190-9. doi: 10.1002/prot.20288. Proteins. 2005. PMID: 15468317
Chemical substructure search in SQL.
Golovin A, Henrick K. Golovin A, et al. Among authors: henrick k. J Chem Inf Model. 2009 Jan;49(1):22-7. doi: 10.1021/ci8003013. J Chem Inf Model. 2009. PMID: 19072559
MSDmotif: exploring protein sites and motifs.
Golovin A, Henrick K. Golovin A, et al. Among authors: henrick k. BMC Bioinformatics. 2008 Jul 17;9:312. doi: 10.1186/1471-2105-9-312. BMC Bioinformatics. 2008. PMID: 18637174 Free PMC article.
Remediation of the protein data bank archive.
Henrick K, Feng Z, Bluhm WF, Dimitropoulos D, Doreleijers JF, Dutta S, Flippen-Anderson JL, Ionides J, Kamada C, Krissinel E, Lawson CL, Markley JL, Nakamura H, Newman R, Shimizu Y, Swaminathan J, Velankar S, Ory J, Ulrich EL, Vranken W, Westbrook J, Yamashita R, Yang H, Young J, Yousufuddin M, Berman HM. Henrick K, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D426-33. doi: 10.1093/nar/gkm937. Epub 2007 Dec 11. Nucleic Acids Res. 2008. PMID: 18073189 Free PMC article.
New electron microscopy database and deposition system.
Tagari M, Newman R, Chagoyen M, Carazo JM, Henrick K. Tagari M, et al. Among authors: henrick k. Trends Biochem Sci. 2002 Nov;27(11):589. doi: 10.1016/s0968-0004(02)02176-x. Trends Biochem Sci. 2002. PMID: 12417136
The European Bioinformatics Institute's data resources.
Brooksbank C, Camon E, Harris MA, Magrane M, Martin MJ, Mulder N, O'Donovan C, Parkinson H, Tuli MA, Apweiler R, Birney E, Brazma A, Henrick K, Lopez R, Stoesser G, Stoehr P, Cameron G. Brooksbank C, et al. Among authors: henrick k. Nucleic Acids Res. 2003 Jan 1;31(1):43-50. doi: 10.1093/nar/gkg066. Nucleic Acids Res. 2003. PMID: 12519944 Free PMC article.
Data deposition and annotation at the worldwide protein data bank.
Dutta S, Burkhardt K, Swaminathan GJ, Kosada T, Henrick K, Nakamura H, Berman HM. Dutta S, et al. Among authors: henrick k. Methods Mol Biol. 2008;426:81-101. doi: 10.1007/978-1-60327-058-8_5. Methods Mol Biol. 2008. PMID: 18542858
Using MSDchem to search the PDB ligand dictionary.
Dimitropoulos D, Ionides J, Henrick K. Dimitropoulos D, et al. Among authors: henrick k. Curr Protoc Bioinformatics. 2006 Oct;Chapter 14:Unit14.3. doi: 10.1002/0471250953.bi1403s15. Curr Protoc Bioinformatics. 2006. PMID: 18428761 unified data resource for CryoEM.
Lawson CL, Baker ML, Best C, Bi C, Dougherty M, Feng P, van Ginkel G, Devkota B, Lagerstedt I, Ludtke SJ, Newman RH, Oldfield TJ, Rees I, Sahni G, Sala R, Velankar S, Warren J, Westbrook JD, Henrick K, Kleywegt GJ, Berman HM, Chiu W. Lawson CL, et al. Among authors: henrick k. Nucleic Acids Res. 2011 Jan;39(Database issue):D456-64. doi: 10.1093/nar/gkq880. Epub 2010 Oct 8. Nucleic Acids Res. 2011. PMID: 20935055 Free PMC article.
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