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Dissecting eukaryotic translation and its control by ribosome density mapping.
Arava Y, Boas FE, Brown PO, Herschlag D. Arava Y, et al. Among authors: herschlag d. Nucleic Acids Res. 2005 Apr 28;33(8):2421-32. doi: 10.1093/nar/gki331. Print 2005. Nucleic Acids Res. 2005. PMID: 15860778 Free PMC article.
Mutations at the guanosine-binding site of the Tetrahymena ribozyme also affect site-specific hydrolysis.
Legault P, Herschlag D, Celander DW, Cech TR. Legault P, et al. Among authors: herschlag d. Nucleic Acids Res. 1992 Dec 25;20(24):6613-9. doi: 10.1093/nar/20.24.6613. Nucleic Acids Res. 1992. PMID: 1480482 Free PMC article.
RNA chaperones and the RNA folding problem.
Herschlag D. Herschlag D. J Biol Chem. 1995 Sep 8;270(36):20871-4. doi: 10.1074/jbc.270.36.20871. J Biol Chem. 1995. PMID: 7545662 Review. No abstract available.
Use of binding energy by an RNA enzyme for catalysis by positioning and substrate destabilization.
Narlikar GJ, Gopalakrishnan V, McConnell TS, Usman N, Herschlag D. Narlikar GJ, et al. Among authors: herschlag d. Proc Natl Acad Sci U S A. 1995 Apr 25;92(9):3668-72. doi: 10.1073/pnas.92.9.3668. Proc Natl Acad Sci U S A. 1995. PMID: 7731962 Free PMC article.
Effects of oligonucleotide length and atomic composition on stimulation of the ATPase activity of translation initiation factor elF4A.
Peck ML, Herschlag D. Peck ML, et al. Among authors: herschlag d. RNA. 1999 Sep;5(9):1210-21. doi: 10.1017/s1355838299990817. RNA. 1999. PMID: 10496222 Free PMC article.
Three metal ions at the active site of the Tetrahymena group I ribozyme.
Shan So, Yoshida A, Sun S, Piccirilli JA, Herschlag D. Shan So, et al. Among authors: herschlag d. Proc Natl Acad Sci U S A. 1999 Oct 26;96(22):12299-304. doi: 10.1073/pnas.96.22.12299. Proc Natl Acad Sci U S A. 1999. PMID: 10535916 Free PMC article.
Kinetic dissection of fundamental processes of eukaryotic translation initiation in vitro.
Lorsch JR, Herschlag D. Lorsch JR, et al. Among authors: herschlag d. EMBO J. 1999 Dec 1;18(23):6705-17. doi: 10.1093/emboj/18.23.6705. EMBO J. 1999. PMID: 10581244 Free PMC article.
Precision and functional specificity in mRNA decay.
Wang Y, Liu CL, Storey JD, Tibshirani RJ, Herschlag D, Brown PO. Wang Y, et al. Among authors: herschlag d. Proc Natl Acad Sci U S A. 2002 Apr 30;99(9):5860-5. doi: 10.1073/pnas.092538799. Epub 2002 Apr 23. Proc Natl Acad Sci U S A. 2002. PMID: 11972065 Free PMC article.
Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae.
Arava Y, Wang Y, Storey JD, Liu CL, Brown PO, Herschlag D. Arava Y, et al. Among authors: herschlag d. Proc Natl Acad Sci U S A. 2003 Apr 1;100(7):3889-94. doi: 10.1073/pnas.0635171100. Epub 2003 Mar 26. Proc Natl Acad Sci U S A. 2003. PMID: 12660367 Free PMC article.
Exploration of the transition state for tertiary structure formation between an RNA helix and a large structured RNA.
Bartley LE, Zhuang X, Das R, Chu S, Herschlag D. Bartley LE, et al. Among authors: herschlag d. J Mol Biol. 2003 May 16;328(5):1011-26. doi: 10.1016/s0022-2836(03)00272-9. J Mol Biol. 2003. PMID: 12729738
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