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Comparative genomic indexing reveals the phylogenomics of Escherichia coli pathogens.
Anjum MF, Lucchini S, Thompson A, Hinton JC, Woodward MJ. Anjum MF, et al. Infect Immun. 2003 Aug;71(8):4674-83. doi: 10.1128/iai.71.8.4674-4683.2003. Infect Immun. 2003. PMID: 12874348 Free PMC article.
ChIP-seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization.
Perkins TT, Davies MR, Klemm EJ, Rowley G, Wileman T, James K, Keane T, Maskell D, Hinton JC, Dougan G, Kingsley RA. Perkins TT, et al. Mol Microbiol. 2013 Feb;87(3):526-38. doi: 10.1111/mmi.12111. Epub 2012 Dec 19. Mol Microbiol. 2013. PMID: 23190111 Free PMC article.
Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA.
Sharma CM, Papenfort K, Pernitzsch SR, Mollenkopf HJ, Hinton JC, Vogel J. Sharma CM, et al. Mol Microbiol. 2011 Sep;81(5):1144-65. doi: 10.1111/j.1365-2958.2011.07751.x. Epub 2011 Jul 27. Mol Microbiol. 2011. PMID: 21696468
Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis.
Papenfort K, Pfeiffer V, Lucchini S, Sonawane A, Hinton JC, Vogel J. Papenfort K, et al. Mol Microbiol. 2008 May;68(4):890-906. doi: 10.1111/j.1365-2958.2008.06189.x. Epub 2008 Apr 8. Mol Microbiol. 2008. PMID: 18399940
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