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17 results
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Noise minimization in eukaryotic gene expression.
Fraser HB, Hirsh AE, Giaever G, Kumm J, Eisen MB. Fraser HB, et al. Among authors: hirsh ae. PLoS Biol. 2004 Jun;2(6):e137. doi: 10.1371/journal.pbio.0020137. Epub 2004 Apr 27. PLoS Biol. 2004. PMID: 15124029 Free PMC article.
Adjusting for selection on synonymous sites in estimates of evolutionary distance.
Hirsh AE, Fraser HB, Wall DP. Hirsh AE, et al. Mol Biol Evol. 2005 Jan;22(1):174-7. doi: 10.1093/molbev/msh265. Epub 2004 Sep 15. Mol Biol Evol. 2005. PMID: 15371530
Functional genomic analysis of the rates of protein evolution.
Wall DP, Hirsh AE, Fraser HB, Kumm J, Giaever G, Eisen MB, Feldman MW. Wall DP, et al. Among authors: hirsh ae. Proc Natl Acad Sci U S A. 2005 Apr 12;102(15):5483-8. doi: 10.1073/pnas.0501761102. Epub 2005 Mar 30. Proc Natl Acad Sci U S A. 2005. PMID: 15800036 Free PMC article.
Coevolution of gene expression among interacting proteins.
Fraser HB, Hirsh AE, Wall DP, Eisen MB. Fraser HB, et al. Among authors: hirsh ae. Proc Natl Acad Sci U S A. 2004 Jun 15;101(24):9033-8. doi: 10.1073/pnas.0402591101. Epub 2004 Jun 2. Proc Natl Acad Sci U S A. 2004. PMID: 15175431 Free PMC article.
Evolutionary rate depends on number of protein-protein interactions independently of gene expression level.
Fraser HB, Hirsh AE. Fraser HB, et al. Among authors: hirsh ae. BMC Evol Biol. 2004 May 27;4:13. doi: 10.1186/1471-2148-4-13. BMC Evol Biol. 2004. PMID: 15165289 Free PMC article.
Evolutionary rate in the protein interaction network.
Fraser HB, Hirsh AE, Steinmetz LM, Scharfe C, Feldman MW. Fraser HB, et al. Among authors: hirsh ae. Science. 2002 Apr 26;296(5568):750-2. doi: 10.1126/science.1068696. Science. 2002. PMID: 11976460
A simple dependence between protein evolution rate and the number of protein-protein interactions.
Fraser HB, Wall DP, Hirsh AE. Fraser HB, et al. Among authors: hirsh ae. BMC Evol Biol. 2003 May 23;3:11. doi: 10.1186/1471-2148-3-11. Epub 2003 May 23. BMC Evol Biol. 2003. PMID: 12769820 Free PMC article.
Protein dispensability and rate of evolution.
Hirsh AE, Fraser HB. Hirsh AE, et al. Nature. 2001 Jun 28;411(6841):1046-9. doi: 10.1038/35082561. Nature. 2001. PMID: 11429604
Nonadaptive explanations for signatures of partial selective sweeps in Drosophila.
Macpherson JM, González J, Witten DM, Davis JC, Rosenberg NA, Hirsh AE, Petrov DA. Macpherson JM, et al. Among authors: hirsh ae. Mol Biol Evol. 2008 Jun;25(6):1025-42. doi: 10.1093/molbev/msn007. Epub 2008 Jan 16. Mol Biol Evol. 2008. PMID: 18199829 Free PMC article.
Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains.
Tsolaki AG, Hirsh AE, DeRiemer K, Enciso JA, Wong MZ, Hannan M, Goguet de la Salmoniere YO, Aman K, Kato-Maeda M, Small PM. Tsolaki AG, et al. Among authors: hirsh ae. Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4865-70. doi: 10.1073/pnas.0305634101. Epub 2004 Mar 15. Proc Natl Acad Sci U S A. 2004. PMID: 15024109 Free PMC article.
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