Hoff KJ[Author] - Search Results

Year	Number of Results
2008	1
2009	2
2013	1
2014	1
2015	3
2016	1
2018	1
2019	5
2020	3
2021	2

1

Whole-Genome Annotation with BRAKER.

Hoff KJ, Lomsadze A, Borodovsky M, Stanke M. Hoff KJ, et al. Methods Mol Biol. 2019;1962:65-95. doi: 10.1007/978-1-4939-9173-0_5. Methods Mol Biol. 2019. PMID: 31020555 Free PMC article.

2

VARUS: sampling complementary RNA reads from the sequence read archive.

Stanke M, Bruhn W, Becker F, Hoff KJ. Stanke M, et al. Among authors: hoff kj. BMC Bioinformatics. 2019 Nov 8;20(1):558. doi: 10.1186/s12859-019-3182-x. BMC Bioinformatics. 2019. PMID: 31703556 Free PMC article.

3

MakeHub: Fully Automated Generation of UCSC Genome Browser Assembly Hubs.

Hoff KJ. Hoff KJ. Genomics Proteomics Bioinformatics. 2019 Oct;17(5):546-549. doi: 10.1016/j.gpb.2019.05.003. Epub 2020 Jan 28. Genomics Proteomics Bioinformatics. 2019. PMID: 32001327 Free PMC article.

4

Inhibition of the CCL2 receptor, CCR2, enhances tumor response to immune checkpoint therapy.

Tu MM, Abdel-Hafiz HA, Jones RT, Jean A, Hoff KJ, Duex JE, Chauca-Diaz A, Costello JC, Dancik GM, Tamburini BAJ, Czerniak B, Kaye J, Theodorescu D. Tu MM, et al. Among authors: hoff kj. Commun Biol. 2020 Nov 27;3(1):720. doi: 10.1038/s42003-020-01441-y. Commun Biol. 2020. PMID: 33247183 Free PMC article.

5

An initial comparative genomic autopsy of wasting disease in sea stars.

Ruiz-Ramos DV, Schiebelhut LM, Hoff KJ, Wares JP, Dawson MN. Ruiz-Ramos DV, et al. Among authors: hoff kj. Mol Ecol. 2020 Mar;29(6):1087-1102. doi: 10.1111/mec.15386. Epub 2020 Mar 17. Mol Ecol. 2020. PMID: 32069379

6

Predicting Genes in Single Genomes with AUGUSTUS.

Hoff KJ, Stanke M. Hoff KJ, et al. Curr Protoc Bioinformatics. 2019 Mar;65(1):e57. doi: 10.1002/cpbi.57. Epub 2018 Nov 22. Curr Protoc Bioinformatics. 2019. PMID: 30466165

7

Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria.

Philippe H, Poustka AJ, Chiodin M, Hoff KJ, Dessimoz C, Tomiczek B, Schiffer PH, Müller S, Domman D, Horn M, Kuhl H, Timmermann B, Satoh N, Hikosaka-Katayama T, Nakano H, Rowe ML, Elphick MR, Thomas-Chollier M, Hankeln T, Mertes F, Wallberg A, Rast JP, Copley RR, Martinez P, Telford MJ. Philippe H, et al. Among authors: hoff kj. Curr Biol. 2019 Jun 3;29(11):1818-1826.e6. doi: 10.1016/j.cub.2019.04.009. Epub 2019 May 16. Curr Biol. 2019. PMID: 31104936 Free article.

8

Current methods for automated annotation of protein-coding genes.

Hoff KJ, Stanke M. Hoff KJ, et al. Curr Opin Insect Sci. 2015 Feb;7:8-14. doi: 10.1016/j.cois.2015.02.008. Epub 2015 Mar 7. Curr Opin Insect Sci. 2015. PMID: 32846689 Review.

9

Non-invasive and label-free 3D-visualization shows in vivo oligomerization of the staphylococcal alkaline shock protein 23 (Asp23).

Petersen I, Schlüter R, Hoff KJ, Liebscher V, Bange G, Riedel K, Pané-Farré J. Petersen I, et al. Among authors: hoff kj. Sci Rep. 2020 Jan 10;10(1):125. doi: 10.1038/s41598-019-56907-9. Sci Rep. 2020. PMID: 31924851 Free PMC article.

10

The nervous system of Xenacoelomorpha: a genomic perspective.

Perea-Atienza E, Gavilán B, Chiodin M, Abril JF, Hoff KJ, Poustka AJ, Martinez P. Perea-Atienza E, et al. Among authors: hoff kj. J Exp Biol. 2015 Feb 15;218(Pt 4):618-28. doi: 10.1242/jeb.110379. J Exp Biol. 2015. PMID: 25696825 Free article.

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