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A Primer for the Rat Genome Database (RGD).
Laulederkind SJF, Hayman GT, Wang SJ, Smith JR, Petri V, Hoffman MJ, De Pons J, Tutaj MA, Ghiasvand O, Tutaj M, Thota J, Dwinell MR, Shimoyama M. Laulederkind SJF, et al. Among authors: hoffman mj. Methods Mol Biol. 2018;1757:163-209. doi: 10.1007/978-1-4939-7737-6_8. Methods Mol Biol. 2018. PMID: 29761460 Free PMC article.
The Rat Genome Database (RGD) facilitates genomic and phenotypic data integration across multiple species for biomedical research.
Kaldunski ML, Smith JR, Hayman GT, Brodie K, De Pons JL, Demos WM, Gibson AC, Hill ML, Hoffman MJ, Lamers L, Laulederkind SJF, Nalabolu HS, Thorat K, Thota J, Tutaj M, Tutaj MA, Vedi M, Wang SJ, Zacher S, Dwinell MR, Kwitek AE. Kaldunski ML, et al. Among authors: hoffman mj. Mamm Genome. 2022 Mar;33(1):66-80. doi: 10.1007/s00335-021-09932-x. Epub 2021 Nov 5. Mamm Genome. 2022. PMID: 34741192 Free PMC article.
Rat Genome Databases, Repositories, and Tools.
Laulederkind SJF, Hayman GT, Wang SJ, Hoffman MJ, Smith JR, Bolton ER, De Pons J, Tutaj MA, Tutaj M, Thota J, Dwinell MR, Shimoyama M. Laulederkind SJF, et al. Among authors: hoffman mj. Methods Mol Biol. 2019;2018:71-96. doi: 10.1007/978-1-4939-9581-3_3. Methods Mol Biol. 2019. PMID: 31228152
The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform.
Smith JR, Hayman GT, Wang SJ, Laulederkind SJF, Hoffman MJ, Kaldunski ML, Tutaj M, Thota J, Nalabolu HS, Ellanki SLR, Tutaj MA, De Pons JL, Kwitek AE, Dwinell MR, Shimoyama ME. Smith JR, et al. Among authors: hoffman mj. Nucleic Acids Res. 2020 Jan 8;48(D1):D731-D742. doi: 10.1093/nar/gkz1041. Nucleic Acids Res. 2020. PMID: 31713623 Free PMC article.
MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses.
Vedi M, Nalabolu HS, Lin CW, Hoffman MJ, Smith JR, Brodie K, De Pons JL, Demos WM, Gibson AC, Hayman GT, Hill ML, Kaldunski ML, Lamers L, Laulederkind SJF, Thorat K, Thota J, Tutaj M, Tutaj MA, Wang SJ, Zacher S, Dwinell MR, Kwitek AE. Vedi M, et al. Among authors: hoffman mj. Genetics. 2022 Apr 4;220(4):iyac005. doi: 10.1093/genetics/iyac005. Genetics. 2022. PMID: 35380657 Free PMC article.
Identifying multiple causative genes at a single GWAS locus.
Flister MJ, Tsaih SW, O'Meara CC, Endres B, Hoffman MJ, Geurts AM, Dwinell MR, Lazar J, Jacob HJ, Moreno C. Flister MJ, et al. Among authors: hoffman mj. Genome Res. 2013 Dec;23(12):1996-2002. doi: 10.1101/gr.160283.113. Epub 2013 Sep 4. Genome Res. 2013. PMID: 24006081 Free PMC article.
A 4.1-Mb congenic region of Rf-4 contributes to glomerular permeability.
O'Meara CC, Lutz MM, Sarkis AB, Xu H, Kothinti RK, Hoffman M, Moreno C, Tabatabai NM, Lazar J, Roman RJ, Jacob HJ. O'Meara CC, et al. J Am Soc Nephrol. 2012 May;23(5):825-33. doi: 10.1681/ASN.2011080805. Epub 2012 Feb 16. J Am Soc Nephrol. 2012. PMID: 22343117 Free PMC article.
Identification of hypertension susceptibility loci on rat chromosome 12.
Flister MJ, Prisco SZ, Sarkis AB, O'Meara CC, Hoffman M, Wendt-Andrae J, Moreno C, Lazar J, Jacob HJ. Flister MJ, et al. Among authors: hoffman m. Hypertension. 2012 Oct;60(4):942-8. doi: 10.1161/HYPERTENSIONAHA.112.198200. Epub 2012 Aug 6. Hypertension. 2012. PMID: 22868394 Free PMC article.
79 results