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Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections.
Salipante SJ, Sengupta DJ, Rosenthal C, Costa G, Spangler J, Sims EH, Jacobs MA, Miller SI, Hoogestraat DR, Cookson BT, McCoy C, Matsen FA, Shendure J, Lee CC, Harkins TT, Hoffman NG. Salipante SJ, et al. Among authors: hoffman ng. PLoS One. 2013 May 29;8(5):e65226. doi: 10.1371/journal.pone.0065226. Print 2013. PLoS One. 2013. PMID: 23734239 Free PMC article.
Molecular diagnosis of Actinomadura madurae infection by 16S rRNA deep sequencing.
Salipante SJ, Sengupta DJ, Hoogestraat DR, Cummings LA, Bryant BH, Natividad C, Thielges S, Monsaas PW, Chau M, Barbee LA, Rosenthal C, Cookson BT, Hoffman NG. Salipante SJ, et al. Among authors: hoffman ng. J Clin Microbiol. 2013 Dec;51(12):4262-5. doi: 10.1128/JCM.02227-13. Epub 2013 Oct 9. J Clin Microbiol. 2013. PMID: 24108607 Free PMC article.
Validation and implementation of targeted capture and sequencing for the detection of actionable mutation, copy number variation, and gene rearrangement in clinical cancer specimens.
Pritchard CC, Salipante SJ, Koehler K, Smith C, Scroggins S, Wood B, Wu D, Lee MK, Dintzis S, Adey A, Liu Y, Eaton KD, Martins R, Stricker K, Margolin KA, Hoffman N, Churpek JE, Tait JF, King MC, Walsh T. Pritchard CC, et al. J Mol Diagn. 2014 Jan;16(1):56-67. doi: 10.1016/j.jmoldx.2013.08.004. Epub 2013 Nov 2. J Mol Diagn. 2014. PMID: 24189654 Free PMC article.
Performance comparison of Illumina and ion torrent next-generation sequencing platforms for 16S rRNA-based bacterial community profiling.
Salipante SJ, Kawashima T, Rosenthal C, Hoogestraat DR, Cummings LA, Sengupta DJ, Harkins TT, Cookson BT, Hoffman NG. Salipante SJ, et al. Among authors: hoffman ng. Appl Environ Microbiol. 2014 Dec;80(24):7583-91. doi: 10.1128/AEM.02206-14. Epub 2014 Sep 26. Appl Environ Microbiol. 2014. PMID: 25261520 Free PMC article.
Erratum for Salipante et al., Performance Comparison of Illumina and Ion Torrent Next-Generation Sequencing Platforms for 16S rRNA-Based Bacterial Community Profiling.
Salipante SJ, Kawashima T, Rosenthal C, Hoogestraat DR, Cummings LA, Sengupta DJ, Harkins TT, Cookson BT, Hoffman NG. Salipante SJ, et al. Among authors: hoffman ng. Appl Environ Microbiol. 2016 Jun 30;82(14):4453. doi: 10.1128/AEM.01390-16. Print 2016 Jul 15. Appl Environ Microbiol. 2016. PMID: 27364849 Free PMC article. No abstract available.
66 results