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Did you mean honkala A[Author] (7 results)?
A community effort to assess and improve drug sensitivity prediction algorithms.
Costello JC, Heiser LM, Georgii E, Gönen M, Menden MP, Wang NJ, Bansal M, Ammad-ud-din M, Hintsanen P, Khan SA, Mpindi JP, Kallioniemi O, Honkela A, Aittokallio T, Wennerberg K; NCI DREAM Community, Collins JJ, Gallahan D, Singer D, Saez-Rodriguez J, Kaski S, Gray JW, Stolovitzky G. Costello JC, et al. Among authors: Honkela A. Nat Biotechnol. 2014 Dec;32(12):1202-12. doi: 10.1038/nbt.2877. Epub 2014 Jun 1. Nat Biotechnol. 2014. PMID: 24880487 Free PMC article.
Identifying Bacterial Strains from Sequencing Data.
Mäklin T, Corander J, Honkela A. Mäklin T, et al. Among authors: Honkela A. Methods Mol Biol. 2018;1807:1-7. doi: 10.1007/978-1-4939-8561-6_1. Methods Mol Biol. 2018. PMID: 30030799
Bayesian identification of bacterial strains from sequencing data.
Sankar A, Malone B, Bayliss SC, Pascoe B, Méric G, Hitchings MD, Sheppard SK, Feil EJ, Corander J, Honkela A. Sankar A, et al. Among authors: Honkela A. Microb Genom. 2016 Aug 25;2(8):e000075. doi: 10.1099/mgen.0.000075. eCollection 2016 Aug. Microb Genom. 2016. PMID: 28348870 Free PMC article.
Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays.
Honkela A, Peltonen J, Topa H, Charapitsa I, Matarese F, Grote K, Stunnenberg HG, Reid G, Lawrence ND, Rattray M. Honkela A, et al. Proc Natl Acad Sci U S A. 2015 Oct 20;112(42):13115-20. doi: 10.1073/pnas.1420404112. Epub 2015 Oct 5. Proc Natl Acad Sci U S A. 2015. PMID: 26438844 Free PMC article.
Representation transfer for differentially private drug sensitivity prediction.
Niinimäki T, Heikkilä MA, Honkela A, Kaski S. Niinimäki T, et al. Among authors: Honkela A. Bioinformatics. 2019 Jul 15;35(14):i218-i224. doi: 10.1093/bioinformatics/btz373. Bioinformatics. 2019. PMID: 31510659 Free PMC article.
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