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SBML Level 3 package: Hierarchical Model Composition, Version 1 Release 3.
Smith LP, Hucka M, Hoops S, Finney A, Ginkel M, Myers CJ, Moraru I, Liebermeister W. Smith LP, et al. Among authors: hoops s. J Integr Bioinform. 2015 Sep 4;12(2):268. doi: 10.2390/biecoll-jib-2015-268. J Integr Bioinform. 2015. PMID: 26528566 Free PMC article.
COPASI--a COmplex PAthway SImulator.
Hoops S, Sahle S, Gauges R, Lee C, Pahle J, Simus N, Singhal M, Xu L, Mendes P, Kummer U. Hoops S, et al. Bioinformatics. 2006 Dec 15;22(24):3067-74. doi: 10.1093/bioinformatics/btl485. Epub 2006 Oct 10. Bioinformatics. 2006. PMID: 17032683
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2.
Hucka M, Bergmann FT, Chaouiya C, Dräger A, Hoops S, Keating SM, König M, Novère NL, Myers CJ, Olivier BG, Sahle S, Schaff JC, Sheriff R, Smith LP, Waltemath D, Wilkinson DJ, Zhang F. Hucka M, et al. Among authors: hoops s. J Integr Bioinform. 2019 Jun 20;16(2):20190021. doi: 10.1515/jib-2019-0021. J Integr Bioinform. 2019. PMID: 31219795 Free PMC article.
Systems modeling of molecular mechanisms controlling cytokine-driven CD4+ T cell differentiation and phenotype plasticity.
Carbo A, Hontecillas R, Kronsteiner B, Viladomiu M, Pedragosa M, Lu P, Philipson CW, Hoops S, Marathe M, Eubank S, Bisset K, Wendelsdorf K, Jarrah A, Mei Y, Bassaganya-Riera J. Carbo A, et al. Among authors: hoops s. PLoS Comput Biol. 2013 Apr;9(4):e1003027. doi: 10.1371/journal.pcbi.1003027. Epub 2013 Apr 4. PLoS Comput Biol. 2013. PMID: 23592971 Free PMC article.
86 results