Horvath S - Search Results

1

A general framework for weighted gene co-expression network analysis.

Zhang B, Horvath S. Zhang B, et al. Among authors: horvath s. Stat Appl Genet Mol Biol. 2005;4:Article17. doi: 10.2202/1544-6115.1128. Epub 2005 Aug 12. Stat Appl Genet Mol Biol. 2005. PMID: 16646834

2

Targeted disruption of glycerol kinase gene in mice: expression analysis in liver shows alterations in network partners related to glycerol kinase activity.

MacLennan NK, Rahib L, Shin C, Fang Z, Horvath S, Dean J, Liao JC, McCabe ER, Dipple KM. MacLennan NK, et al. Among authors: horvath s. Hum Mol Genet. 2006 Feb 1;15(3):405-15. doi: 10.1093/hmg/ddi457. Epub 2005 Dec 20. Hum Mol Genet. 2006. PMID: 16368706

3

Distinct gene expression profiles in adult mouse heart following targeted MAP kinase activation.

Mitchell S, Ota A, Foster W, Zhang B, Fang Z, Patel S, Nelson SF, Horvath S, Wang Y. Mitchell S, et al. Among authors: horvath s. Physiol Genomics. 2006 Mar 13;25(1):50-9. doi: 10.1152/physiolgenomics.00224.2005. Epub 2005 Dec 20. Physiol Genomics. 2006. PMID: 16368875

4

Gene connectivity, function, and sequence conservation: predictions from modular yeast co-expression networks.

Carlson MR, Zhang B, Fang Z, Mischel PS, Horvath S, Nelson SF. Carlson MR, et al. Among authors: horvath s. BMC Genomics. 2006 Mar 3;7:40. doi: 10.1186/1471-2164-7-40. BMC Genomics. 2006. PMID: 16515682 Free PMC article.

5

Identification of inflammatory gene modules based on variations of human endothelial cell responses to oxidized lipids.

Gargalovic PS, Imura M, Zhang B, Gharavi NM, Clark MJ, Pagnon J, Yang WP, He A, Truong A, Patel S, Nelson SF, Horvath S, Berliner JA, Kirchgessner TG, Lusis AJ. Gargalovic PS, et al. Among authors: horvath s. Proc Natl Acad Sci U S A. 2006 Aug 22;103(34):12741-6. doi: 10.1073/pnas.0605457103. Epub 2006 Aug 15. Proc Natl Acad Sci U S A. 2006. PMID: 16912112 Free PMC article.

6

Integrating genetic and network analysis to characterize genes related to mouse weight.

Ghazalpour A, Doss S, Zhang B, Wang S, Plaisier C, Castellanos R, Brozell A, Schadt EE, Drake TA, Lusis AJ, Horvath S. Ghazalpour A, et al. Among authors: horvath s. PLoS Genet. 2006 Aug 18;2(8):e130. doi: 10.1371/journal.pgen.0020130. Epub 2006 Jul 5. PLoS Genet. 2006. PMID: 16934000 Free PMC article.

7

Finding the best ridge regression subset by genetic algorithms: applications to multilocus quantitative trait mapping.

Zhang B, Horvath S. Zhang B, et al. Among authors: horvath s. Conf Proc IEEE Eng Med Biol Soc. 2004;2004:2793-6. doi: 10.1109/IEMBS.2004.1403798. Conf Proc IEEE Eng Med Biol Soc. 2004. PMID: 17270857

8

Weighted gene coexpression network analysis strategies applied to mouse weight.

Fuller TF, Ghazalpour A, Aten JE, Drake TA, Lusis AJ, Horvath S. Fuller TF, et al. Among authors: horvath s. Mamm Genome. 2007 Jul;18(6-7):463-72. doi: 10.1007/s00335-007-9043-3. Epub 2007 Aug 1. Mamm Genome. 2007. PMID: 17668265 Free PMC article.

9

Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R.

Langfelder P, Zhang B, Horvath S. Langfelder P, et al. Among authors: horvath s. Bioinformatics. 2008 Mar 1;24(5):719-20. doi: 10.1093/bioinformatics/btm563. Epub 2007 Nov 16. Bioinformatics. 2008. PMID: 18024473

10

Ridge regression based hybrid genetic algorithms for multi-locus quantitative trait mapping.

Zhang B, Horvath S. Zhang B, et al. Among authors: horvath s. Int J Bioinform Res Appl. 2005;1(3):261-72. doi: 10.1504/IJBRA.2005.007905. Int J Bioinform Res Appl. 2005. PMID: 18048135

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