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Drosophila by the dozen.
Celniker SE, Hoskins RA. Celniker SE, et al. Among authors: hoskins ra. Genome Biol. 2007;8(7):309. doi: 10.1186/gb-2007-8-7-309. Genome Biol. 2007. PMID: 17634150 Free PMC article.
A library of MiMICs allows tagging of genes and reversible, spatial and temporal knockdown of proteins in Drosophila.
Nagarkar-Jaiswal S, Lee PT, Campbell ME, Chen K, Anguiano-Zarate S, Gutierrez MC, Busby T, Lin WW, He Y, Schulze KL, Booth BW, Evans-Holm M, Venken KJ, Levis RW, Spradling AC, Hoskins RA, Bellen HJ. Nagarkar-Jaiswal S, et al. Among authors: hoskins ra. Elife. 2015 Mar 31;4:e05338. doi: 10.7554/eLife.05338. Elife. 2015. PMID: 25824290 Free PMC article.
Quantitative analysis of bristle number in Drosophila mutants identifies genes involved in neural development.
Norga KK, Gurganus MC, Dilda CL, Yamamoto A, Lyman RF, Patel PH, Rubin GM, Hoskins RA, Mackay TF, Bellen HJ. Norga KK, et al. Among authors: hoskins ra. Curr Biol. 2003 Aug 19;13(16):1388-96. doi: 10.1016/s0960-9822(03)00546-3. Curr Biol. 2003. PMID: 12932322
Comparative validation of the D. melanogaster modENCODE transcriptome annotation.
Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, Clough E, Dasgupta A, Gubbala S, Han Y, Jayaseelan JC, Kalra D, Kim YA, Kovar CL, Lee SL, Li M, Malley JD, Malone JH, Mathew T, Mattiuzzo NR, Munidasa M, Muzny DM, Ongeri F, Perales L, Przytycka TM, Pu LL, Robinson G, Thornton RL, Saada N, Scherer SE, Smith HE, Vinson C, Warner CB, Worley KC, Wu YQ, Zou X, Cherbas P, Kellis M, Eisen MB, Piano F, Kionte K, Fitch DH, Sternberg PW, Cutter AD, Duff MO, Hoskins RA, Graveley BR, Gibbs RA, Bickel PJ, Kopp A, Carninci P, Celniker SE, Oliver B, Richards S. Chen ZX, et al. Among authors: hoskins ra. Genome Res. 2014 Jul;24(7):1209-23. doi: 10.1101/gr.159384.113. Genome Res. 2014. PMID: 24985915 Free PMC article.
The transcriptional diversity of 25 Drosophila cell lines.
Cherbas L, Willingham A, Zhang D, Yang L, Zou Y, Eads BD, Carlson JW, Landolin JM, Kapranov P, Dumais J, Samsonova A, Choi JH, Roberts J, Davis CA, Tang H, van Baren MJ, Ghosh S, Dobin A, Bell K, Lin W, Langton L, Duff MO, Tenney AE, Zaleski C, Brent MR, Hoskins RA, Kaufman TC, Andrews J, Graveley BR, Perrimon N, Celniker SE, Gingeras TR, Cherbas P. Cherbas L, et al. Among authors: hoskins ra. Genome Res. 2011 Feb;21(2):301-14. doi: 10.1101/gr.112961.110. Epub 2010 Dec 22. Genome Res. 2011. PMID: 21177962 Free PMC article.
Genome-wide analysis of promoter architecture in Drosophila melanogaster.
Hoskins RA, Landolin JM, Brown JB, Sandler JE, Takahashi H, Lassmann T, Yu C, Booth BW, Zhang D, Wan KH, Yang L, Boley N, Andrews J, Kaufman TC, Graveley BR, Bickel PJ, Carninci P, Carlson JW, Celniker SE. Hoskins RA, et al. Genome Res. 2011 Feb;21(2):182-92. doi: 10.1101/gr.112466.110. Epub 2010 Dec 22. Genome Res. 2011. PMID: 21177961 Free PMC article.
Genome-guided transcript assembly by integrative analysis of RNA sequence data.
Boley N, Stoiber MH, Booth BW, Wan KH, Hoskins RA, Bickel PJ, Celniker SE, Brown JB. Boley N, et al. Among authors: hoskins ra. Nat Biotechnol. 2014 Apr;32(4):341-6. doi: 10.1038/nbt.2850. Epub 2014 Mar 16. Nat Biotechnol. 2014. PMID: 24633242 Free PMC article.
The Release 6 reference sequence of the Drosophila melanogaster genome.
Hoskins RA, Carlson JW, Wan KH, Park S, Mendez I, Galle SE, Booth BW, Pfeiffer BD, George RA, Svirskas R, Krzywinski M, Schein J, Accardo MC, Damia E, Messina G, Méndez-Lago M, de Pablos B, Demakova OV, Andreyeva EN, Boldyreva LV, Marra M, Carvalho AB, Dimitri P, Villasante A, Zhimulev IF, Rubin GM, Karpen GH, Celniker SE. Hoskins RA, et al. Genome Res. 2015 Mar;25(3):445-58. doi: 10.1101/gr.185579.114. Epub 2015 Jan 14. Genome Res. 2015. PMID: 25589440 Free PMC article.
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE. Hoskins RA, et al. Science. 2007 Jun 15;316(5831):1625-8. doi: 10.1126/science.1139816. Science. 2007. PMID: 17569867 Free PMC article.
Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP).
Hoskins RA, Stapleton M, George RA, Yu C, Wan KH, Carlson JW, Celniker SE. Hoskins RA, et al. Nucleic Acids Res. 2005 Dec 2;33(21):e185. doi: 10.1093/nar/gni184. Nucleic Acids Res. 2005. PMID: 16326860 Free PMC article.
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