Skip to main page content
Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

My NCBI Filters
Text availability
Article attribute
Article type
Publication date

Search Results

18 results
Filters applied: . Clear all Results are displayed in a computed author sort order. Results by year timeline is unavailable
Page 1
From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli.
Thieffry D, Huerta AM, Pérez-Rueda E, Collado-Vides J. Thieffry D, et al. Among authors: huerta am. Bioessays. 1998 May;20(5):433-40. doi: 10.1002/(SICI)1521-1878(199805)20:5<433::AID-BIES10>3.0.CO;2-2. Bioessays. 1998. PMID: 9670816
RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J. Salgado H, et al. Among authors: huerta am. Nucleic Acids Res. 2013 Jan;41(Database issue):D203-13. doi: 10.1093/nar/gks1201. Epub 2012 Nov 29. Nucleic Acids Res. 2013. PMID: 23203884 Free PMC article.
Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Positional conservation of clusters of overlapping promoter-like sequences in enterobacterial genomes.
Huerta AM, Collado-Vides J, Francino MP; SMBE Tri-National Young Investigators. Huerta AM, et al. Mol Biol Evol. 2006 May;23(5):997-1010. doi: 10.1093/molbev/msk004. Epub 2006 Mar 17. Mol Biol Evol. 2006. PMID: 16547149
Evidence classification of high-throughput protocols and confidence integration in RegulonDB.
Weiss V, Medina-Rivera A, Huerta AM, Santos-Zavaleta A, Salgado H, Morett E, Collado-Vides J. Weiss V, et al. Among authors: huerta am. Database (Oxford). 2013 Jan 17;2013:bas059. doi: 10.1093/database/bas059. Print 2013. Database (Oxford). 2013. PMID: 23327937 Free PMC article.
RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Gama-Castro S, Salgado H, Peralta-Gil M, Santos-Zavaleta A, Muñiz-Rascado L, Solano-Lira H, Jimenez-Jacinto V, Weiss V, García-Sotelo JS, López-Fuentes A, Porrón-Sotelo L, Alquicira-Hernández S, Medina-Rivera A, Martínez-Flores I, Alquicira-Hernández K, Martínez-Adame R, Bonavides-Martínez C, Miranda-Ríos J, Huerta AM, Mendoza-Vargas A, Collado-Torres L, Taboada B, Vega-Alvarado L, Olvera M, Olvera L, Grande R, Morett E, Collado-Vides J. Gama-Castro S, et al. Among authors: huerta am. Nucleic Acids Res. 2011 Jan;39(Database issue):D98-105. doi: 10.1093/nar/gkq1110. Epub 2010 Nov 4. Nucleic Acids Res. 2011. PMID: 21051347 Free PMC article.
Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli.
Mendoza-Vargas A, Olvera L, Olvera M, Grande R, Vega-Alvarado L, Taboada B, Jimenez-Jacinto V, Salgado H, Juárez K, Contreras-Moreira B, Huerta AM, Collado-Vides J, Morett E. Mendoza-Vargas A, et al. Among authors: huerta am. PLoS One. 2009 Oct 19;4(10):e7526. doi: 10.1371/journal.pone.0007526. PLoS One. 2009. PMID: 19838305 Free PMC article.
RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Gama-Castro S, Jiménez-Jacinto V, Peralta-Gil M, Santos-Zavaleta A, Peñaloza-Spinola MI, Contreras-Moreira B, Segura-Salazar J, Muñiz-Rascado L, Martínez-Flores I, Salgado H, Bonavides-Martínez C, Abreu-Goodger C, Rodríguez-Penagos C, Miranda-Ríos J, Morett E, Merino E, Huerta AM, Treviño-Quintanilla L, Collado-Vides J. Gama-Castro S, et al. Among authors: huerta am. Nucleic Acids Res. 2008 Jan;36(Database issue):D120-4. doi: 10.1093/nar/gkm994. Epub 2007 Dec 23. Nucleic Acids Res. 2008. PMID: 18158297 Free PMC article.
Selection for unequal densities of sigma70 promoter-like signals in different regions of large bacterial genomes.
Huerta AM, Francino MP, Morett E, Collado-Vides J. Huerta AM, et al. PLoS Genet. 2006 Nov 10;2(11):e185. doi: 10.1371/journal.pgen.0020185. Epub 2006 Sep 12. PLoS Genet. 2006. PMID: 17096598 Free PMC article.
Comparative studies of transcriptional regulation mechanisms in a group of eight gamma-proteobacterial genomes.
Espinosa V, González AD, Vasconcelos AT, Huerta AM, Collado-Vides J. Espinosa V, et al. Among authors: huerta am. J Mol Biol. 2005 Nov 18;354(1):184-99. doi: 10.1016/j.jmb.2005.09.037. Epub 2005 Oct 4. J Mol Biol. 2005. PMID: 16236313
Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals.
Huerta AM, Collado-Vides J. Huerta AM, et al. J Mol Biol. 2003 Oct 17;333(2):261-78. doi: 10.1016/j.jmb.2003.07.017. J Mol Biol. 2003. PMID: 14529615
18 results
Jump to page