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BioVenn - a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams.
Hulsen T, de Vlieg J, Alkema W. Hulsen T, et al. BMC Genomics. 2008 Oct 16;9:488. doi: 10.1186/1471-2164-9-488. BMC Genomics. 2008. PMID: 18925949 Free PMC article.
Testing statistical significance scores of sequence comparison methods with structure similarity.
Hulsen T, de Vlieg J, Leunissen JA, Groenen PM. Hulsen T, et al. BMC Bioinformatics. 2006 Oct 12;7:444. doi: 10.1186/1471-2105-7-444. BMC Bioinformatics. 2006. PMID: 17038163 Free PMC article.
Benchmarking ortholog identification methods using functional genomics data.
Hulsen T, Huynen MA, de Vlieg J, Groenen PM. Hulsen T, et al. Genome Biol. 2006;7(4):R31. doi: 10.1186/gb-2006-7-4-r31. Epub 2006 Apr 13. Genome Biol. 2006. PMID: 16613613 Free PMC article.
PhyloPat: phylogenetic pattern analysis of eukaryotic genes.
Hulsen T, de Vlieg J, Groenen PM. Hulsen T, et al. BMC Bioinformatics. 2006 Sep 1;7:398. doi: 10.1186/1471-2105-7-398. BMC Bioinformatics. 2006. PMID: 16948844 Free PMC article.
PhyloPat: an updated version of the phylogenetic pattern database contains gene neighborhood.
Hulsen T, Groenen PM, de Vlieg J, Alkema W. Hulsen T, et al. Nucleic Acids Res. 2009 Jan;37(Database issue):D731-7. doi: 10.1093/nar/gkn645. Epub 2008 Oct 2. Nucleic Acids Res. 2009. PMID: 18832367 Free PMC article.
Evolution of closely linked gene pairs in vertebrate genomes.
Franck E, Hulsen T, Huynen MA, de Jong WW, Lubsen NH, Madsen O. Franck E, et al. Among authors: hulsen t. Mol Biol Evol. 2008 Sep;25(9):1909-21. doi: 10.1093/molbev/msn136. Epub 2008 Jun 19. Mol Biol Evol. 2008. PMID: 18566020
Identification of novel functional TBP-binding sites and general factor repertoires.
Denissov S, van Driel M, Voit R, Hekkelman M, Hulsen T, Hernandez N, Grummt I, Wehrens R, Stunnenberg H. Denissov S, et al. Among authors: hulsen t. EMBO J. 2007 Feb 21;26(4):944-54. doi: 10.1038/sj.emboj.7601550. Epub 2007 Feb 1. EMBO J. 2007. PMID: 17268553 Free PMC article.
Identification of new biomarker candidates for glucocorticoid induced insulin resistance using literature mining.
Fleuren WW, Toonen EJ, Verhoeven S, Frijters R, Hulsen T, Rullmann T, van Schaik R, de Vlieg J, Alkema W. Fleuren WW, et al. Among authors: hulsen t. BioData Min. 2013 Feb 4;6(1):2. doi: 10.1186/1756-0381-6-2. BioData Min. 2013. PMID: 23379763 Free PMC article.
The construction of genome-based transcriptional units.
van Hooff SR, Koster J, Hulsen T, van Schaik BD, Roos M, van Batenburg MF, Versteeg R, van Kampen AH. van Hooff SR, et al. Among authors: hulsen t. OMICS. 2009 Apr;13(2):105-14. doi: 10.1089/omi.2008.0036. OMICS. 2009. PMID: 19320556
From Big Data to Precision Medicine.
Hulsen T, Jamuar SS, Moody AR, Karnes JH, Varga O, Hedensted S, Spreafico R, Hafler DA, McKinney EF. Hulsen T, et al. Front Med (Lausanne). 2019 Mar 1;6:34. doi: 10.3389/fmed.2019.00034. eCollection 2019. Front Med (Lausanne). 2019. PMID: 30881956 Free PMC article. Review.
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