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Bypassing spike sorting: Density-based decoding using spike localization from dense multielectrode probes.
Zhang Y, He T, Boussard J, Windolf C, Winter O, Trautmann E, Roth N, Barrell H, Churchland M, Steinmetz NA; International Brain Laboratory; Varol E, Hurwitz C, Paninski L. Zhang Y, et al. Among authors: hurwitz c. bioRxiv [Preprint]. 2023 Sep 22:2023.09.21.558869. doi: 10.1101/2023.09.21.558869. bioRxiv. 2023. PMID: 37790422 Free PMC article. Preprint.
Ultra-high density electrodes improve detection, yield, and cell type identification in neuronal recordings.
Ye Z, Shelton AM, Shaker JR, Boussard JM, Colonell J, Birman D, Manavi S, Chen S, Windolf C, Hurwitz C, Namima T, Pedraja F, Weiss S, Raducanu B, Ness T, Jia X, Mastroberardino G, Rossi LF, Carandini M, Hausser M, Einevoll GT, Laurent G, Sawtell NB, Bair W, Pasupathy A, Mora-Lopez C, Dutta B, Paninski L, Siegle JH, Koch C, Olsen SR, Harris TD, Steinmetz NA. Ye Z, et al. Among authors: hurwitz c. bioRxiv [Preprint]. 2024 Apr 10:2023.08.23.554527. doi: 10.1101/2023.08.23.554527. bioRxiv. 2024. PMID: 37662298 Free PMC article. Preprint.
Lightning Pose: improved animal pose estimation via semi-supervised learning, Bayesian ensembling, and cloud-native open-source tools.
Biderman D, Whiteway MR, Hurwitz C, Greenspan N, Lee RS, Vishnubhotla A, Warren R, Pedraja F, Noone D, Schartner M, Huntenburg JM, Khanal A, Meijer GT, Noel JP, Pan-Vazquez A, Socha KZ, Urai AE; International Brain Laboratory; Cunningham JP, Sawtell NB, Paninski L. Biderman D, et al. Among authors: hurwitz c. bioRxiv [Preprint]. 2024 Apr 3:2023.04.28.538703. doi: 10.1101/2023.04.28.538703. bioRxiv. 2024. PMID: 37162966 Free PMC article. Preprint.
A modular architecture for organizing, processing and sharing neurophysiology data.
International Brain Laboratory; Bonacchi N, Chapuis GA, Churchland AK, DeWitt EEJ, Faulkner M, Harris KD, Huntenburg JM, Hunter M, Laranjeira IC, Rossant C, Sasaki M, Schartner MM, Shen S, Steinmetz NA, Walker EY, West SJ, Winter O, Wells MJ. International Brain Laboratory, et al. Nat Methods. 2023 Mar;20(3):403-407. doi: 10.1038/s41592-022-01742-6. Epub 2023 Mar 2. Nat Methods. 2023. PMID: 36864199 Free PMC article.
SpikeInterface, a unified framework for spike sorting.
Buccino AP, Hurwitz CL, Garcia S, Magland J, Siegle JH, Hurwitz R, Hennig MH. Buccino AP, et al. Among authors: hurwitz cl. Elife. 2020 Nov 10;9:e61834. doi: 10.7554/eLife.61834. Elife. 2020. PMID: 33170122 Free PMC article.
157 results