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Year Number of Results
2016 3
2017 1
2018 4
2019 1
2020 1
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10 results
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UFBoot2: Improving the Ultrafast Bootstrap Approximation.
Hoang DT, Chernomor O, von Haeseler A, Minh BQ, Vinh LS. Hoang DT, et al. Mol Biol Evol. 2018 Feb 1;35(2):518-522. doi: 10.1093/molbev/msx281. Mol Biol Evol. 2018. PMID: 29077904 Free PMC article.
Complex Models of Sequence Evolution Require Accurate Estimators as Exemplified with the Invariable Site Plus Gamma Model.
Nguyen LT, von Haeseler A, Minh BQ. Nguyen LT, et al. Syst Biol. 2018 May 1;67(3):552-558. doi: 10.1093/sysbio/syx092. Syst Biol. 2018. PMID: 29186593 Free PMC article.
Modeling Site Heterogeneity with Posterior Mean Site Frequency Profiles Accelerates Accurate Phylogenomic Estimation.
Wang HC, Minh BQ, Susko E, Roger AJ. Wang HC, et al. Syst Biol. 2018 Mar 1;67(2):216-235. doi: 10.1093/sysbio/syx068. Syst Biol. 2018. PMID: 28950365
MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation.
Hoang DT, Vinh LS, Flouri T, Stamatakis A, von Haeseler A, Minh BQ. Hoang DT, et al. BMC Evol Biol. 2018 Feb 2;18(1):11. doi: 10.1186/s12862-018-1131-3. BMC Evol Biol. 2018. PMID: 29390973 Free PMC article.
Polymorphism-Aware Species Trees with Advanced Mutation Models, Bootstrap, and Rate Heterogeneity.
Schrempf D, Minh BQ, von Haeseler A, Kosiol C. Schrempf D, et al. Mol Biol Evol. 2019 Jun 1;36(6):1294-1301. doi: 10.1093/molbev/msz043. Mol Biol Evol. 2019. PMID: 30825307 Free PMC article.
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis.
Trifinopoulos J, Nguyen LT, von Haeseler A, Minh BQ. Trifinopoulos J, et al. Nucleic Acids Res. 2016 Jul 8;44(W1):W232-5. doi: 10.1093/nar/gkw256. Epub 2016 Apr 15. Nucleic Acids Res. 2016. PMID: 27084950 Free PMC article.
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices.
Chernomor O, von Haeseler A, Minh BQ. Chernomor O, et al. Syst Biol. 2016 Nov;65(6):997-1008. doi: 10.1093/sysbio/syw037. Epub 2016 Apr 26. Syst Biol. 2016. PMID: 27121966 Free PMC article.
Reversible polymorphism-aware phylogenetic models and their application to tree inference.
Schrempf D, Minh BQ, De Maio N, von Haeseler A, Kosiol C. Schrempf D, et al. J Theor Biol. 2016 Oct 21;407:362-370. doi: 10.1016/j.jtbi.2016.07.042. Epub 2016 Jul 29. J Theor Biol. 2016. PMID: 27480613 Free article.
HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences.
Ratmann O, Wymant C, Colijn C, Danaviah S, Essex M, Frost SDW, Gall A, Gaiseitsiwe S, Grabowski M, Gray R, Guindon S, von Haeseler A, Kaleebu P, Kendall M, Kozlov A, Manasa J, Minh BQ, Moyo S, Novitsky V, Nsubuga R, Pillay S, Quinn TC, Serwadda D, Ssemwanga D, Stamatakis A, Trifinopoulos J, Wawer M, Leigh Brown A, de Oliveira T, Kellam P, Pillay D, Fraser C. Ratmann O, et al. AIDS Res Hum Retroviruses. 2017 Nov;33(11):1083-1098. doi: 10.1089/AID.2017.0061. Epub 2017 May 25. AIDS Res Hum Retroviruses. 2017. PMID: 28540766 Free PMC article.
GHOST: Recovering Historical Signal from Heterotachously Evolved Sequence Alignments.
Crotty SM, Minh BQ, Bean NG, Holland BR, Tuke J, Jermiin LS, Haeseler AV. Crotty SM, et al. Syst Biol. 2020 Mar 1;69(2):249-264. doi: 10.1093/sysbio/syz051. Syst Biol. 2020. PMID: 31364711
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