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118 results
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Postmortem human brain genomics in neuropsychiatric disorders--how far can we go?
Jaffe AE. Jaffe AE. Curr Opin Neurobiol. 2016 Feb;36:107-11. doi: 10.1016/j.conb.2015.11.002. Epub 2015 Dec 10. Curr Opin Neurobiol. 2016. PMID: 26685806 Free PMC article. Review.
Significance analysis and statistical dissection of variably methylated regions.
Jaffe AE, Feinberg AP, Irizarry RA, Leek JT. Jaffe AE, et al. Biostatistics. 2012 Jan;13(1):166-78. doi: 10.1093/biostatistics/kxr013. Epub 2011 Jun 17. Biostatistics. 2012. PMID: 21685414 Free PMC article.
The sva package for removing batch effects and other unwanted variation in high-throughput experiments.
Leek JT, Johnson WE, Parker HS, Jaffe AE, Storey JD. Leek JT, et al. Among authors: jaffe ae. Bioinformatics. 2012 Mar 15;28(6):882-3. doi: 10.1093/bioinformatics/bts034. Epub 2012 Jan 17. Bioinformatics. 2012. PMID: 22257669 Free PMC article.
DNA methylation shows genome-wide association of NFIX, RAPGEF2 and MSRB3 with gestational age at birth.
Lee H, Jaffe AE, Feinberg JI, Tryggvadottir R, Brown S, Montano C, Aryee MJ, Irizarry RA, Herbstman J, Witter FR, Goldman LR, Feinberg AP, Fallin MD. Lee H, et al. Among authors: jaffe ae. Int J Epidemiol. 2012 Feb;41(1):188-99. doi: 10.1093/ije/dyr237. Int J Epidemiol. 2012. PMID: 22422452 Free PMC article.
Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies.
Jaffe AE, Murakami P, Lee H, Leek JT, Fallin MD, Feinberg AP, Irizarry RA. Jaffe AE, et al. Int J Epidemiol. 2012 Feb;41(1):200-9. doi: 10.1093/ije/dyr238. Int J Epidemiol. 2012. PMID: 22422453 Free PMC article.
Use of postmortem human dura mater and scalp for deriving human fibroblast cultures.
Bliss LA, Sams MR, Deep-Soboslay A, Ren-Patterson R, Jaffe AE, Chenoweth JG, Jaishankar A, Kleinman JE, Hyde TM. Bliss LA, et al. Among authors: jaffe ae. PLoS One. 2012;7(9):e45282. doi: 10.1371/journal.pone.0045282. Epub 2012 Sep 27. PLoS One. 2012. PMID: 23028905 Free PMC article.
Paternal age, de novo mutations and schizophrenia.
Jaffe AE, Eaton WW, Straub RE, Marenco S, Weinberger DR. Jaffe AE, et al. Mol Psychiatry. 2014 Mar;19(3):274-5. doi: 10.1038/mp.2013.76. Epub 2013 Jun 11. Mol Psychiatry. 2014. PMID: 23752248 Free PMC article. No abstract available.
Olfactory cells via nasal biopsy reflect the developing brain in gene expression profiles: utility and limitation of the surrogate tissues in research for brain disorders.
Horiuchi Y, Kano S, Ishizuka K, Cascella NG, Ishii S, Talbot CC Jr, Jaffe AE, Okano H, Pevsner J, Colantuoni C, Sawa A. Horiuchi Y, et al. Among authors: jaffe ae. Neurosci Res. 2013 Dec;77(4):247-50. doi: 10.1016/j.neures.2013.09.010. Epub 2013 Oct 11. Neurosci Res. 2013. PMID: 24120685 Free PMC article.
TE-array--a high throughput tool to study transposon transcription.
Gnanakkan VP, Jaffe AE, Dai L, Fu J, Wheelan SJ, Levitsky HI, Boeke JD, Burns KH. Gnanakkan VP, et al. Among authors: jaffe ae. BMC Genomics. 2013 Dec 10;14:869. doi: 10.1186/1471-2164-14-869. BMC Genomics. 2013. PMID: 24325565 Free PMC article.
Gene set bagging for estimating the probability a statistically significant result will replicate.
Jaffe AE, Storey JD, Ji H, Leek JT. Jaffe AE, et al. BMC Bioinformatics. 2013 Dec 12;14:360. doi: 10.1186/1471-2105-14-360. BMC Bioinformatics. 2013. PMID: 24330332 Free PMC article.
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