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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C; Genome Standards Consortium, Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM, Schriml L, Banfield JF, Hugenholtz P, Woyke T. Bowers RM, et al. Version 2. Nat Biotechnol. 2017 Aug 8;35(8):725-731. doi: 10.1038/nbt.3893. Nat Biotechnol. 2017. PMID: 28787424 Free PMC article.
Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis.
Jarett JK, Nayfach S, Podar M, Inskeep W, Ivanova NN, Munson-McGee J, Schulz F, Young M, Jay ZJ, Beam JP, Kyrpides NC, Malmstrom RR, Stepanauskas R, Woyke T. Jarett JK, et al. Microbiome. 2018 Sep 17;6(1):161. doi: 10.1186/s40168-018-0539-8. Microbiome. 2018. PMID: 30223889 Free PMC article.
Trait-Based Comparison of Coral and Sponge Microbiomes.
Fiore CL, Jarett JK, Steinert G, Lesser MP. Fiore CL, et al. Among authors: Jarett JK. Sci Rep. 2020 Feb 11;10(1):2340. doi: 10.1038/s41598-020-59320-9. Sci Rep. 2020. PMID: 32047192 Free PMC article.
Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f.
Chen ML, Becraft ED, Pachiadaki M, Brown JM, Jarett JK, Gasol JM, Ravin NV, Moser DP, Nunoura T, Herndl GJ, Woyke T, Stepanauskas R. Chen ML, et al. Among authors: Jarett JK. Front Microbiol. 2020 Mar 12;11:376. doi: 10.3389/fmicb.2020.00376. eCollection 2020. Front Microbiol. 2020. PMID: 32226422 Free PMC article.
Four Draft Single-Cell Genome Sequences of Novel, Nearly Identical Kiritimatiellaeota Strains Isolated from the Continental Deep Subsurface.
Sackett JD, Kruger BR, Becraft ED, Jarett JK, Stepanauskas R, Woyke T, Moser DP. Sackett JD, et al. Among authors: Jarett JK. Microbiol Resour Announc. 2019 Mar 14;8(11):e01249-18. doi: 10.1128/MRA.01249-18. Microbiol Resour Announc. 2019. PMID: 30938322 Free PMC article.
Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface.
Probst AJ, Ladd B, Jarett JK, Geller-McGrath DE, Sieber CMK, Emerson JB, Anantharaman K, Thomas BC, Malmstrom RR, Stieglmeier M, Klingl A, Woyke T, Ryan MC, Banfield JF. Probst AJ, et al. Among authors: Jarett JK. Nat Microbiol. 2018 Mar;3(3):328-336. doi: 10.1038/s41564-017-0098-y. Epub 2018 Jan 29. Nat Microbiol. 2018. PMID: 29379208 Free PMC article.
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