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Using Systems Biology-based Analysis Approaches to Identify Mechanistically Significant Adverse Drug Reactions: Pulmonary Complications from Combined Use of Anti-TNF╬▒ Agents and Corticosteroids.
Sarangdhar M, Kushwaha A, Dahlquist J, Jegga A, Aronow B. Sarangdhar M, et al. Among authors: jegga a. AMIA Jt Summits Transl Sci Proc. 2013 Mar 18;2013:151-5. eCollection 2013. AMIA Jt Summits Transl Sci Proc. 2013. PMID: 24303326 Free PMC article.
ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems.
Kaimal V, Bardes EE, Tabar SC, Jegga AG, Aronow BJ. Kaimal V, et al. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W96-102. doi: 10.1093/nar/gkq418. Epub 2010 May 19. Nucleic Acids Res. 2010. PMID: 20484371 Free PMC article.
PhenoHM: human-mouse comparative phenome-genome server.
Sardana D, Vasa S, Vepachedu N, Chen J, Gudivada RC, Aronow BJ, Jegga AG. Sardana D, et al. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W165-74. doi: 10.1093/nar/gkq472. Epub 2010 May 27. Nucleic Acids Res. 2010. PMID: 20507906 Free PMC article.
Integrative systems biology approaches to identify and prioritize disease and drug candidate genes.
Kaimal V, Sardana D, Bardes EE, Gudivada RC, Chen J, Jegga AG. Kaimal V, et al. Methods Mol Biol. 2011;700:241-59. doi: 10.1007/978-1-61737-954-3_16. Methods Mol Biol. 2011. PMID: 21204038
Systems biology of the autophagy-lysosomal pathway.
Jegga AG, Schneider L, Ouyang X, Zhang J. Jegga AG, et al. Autophagy. 2011 May;7(5):477-89. doi: 10.4161/auto.7.5.14811. Epub 2011 May 1. Autophagy. 2011. PMID: 21293178 Free PMC article.
The orphan disease networks.
Zhang M, Zhu C, Jacomy A, Lu LJ, Jegga AG. Zhang M, et al. Among authors: jegga ag. Am J Hum Genet. 2011 Jun 10;88(6):755-766. doi: 10.1016/j.ajhg.2011.05.006. Am J Hum Genet. 2011. PMID: 21664998 Free PMC article.
Mining FDA drug labels for medical conditions.
Li Q, Deleger L, Lingren T, Zhai H, Kaiser M, Stoutenborough L, Jegga AG, Cohen KB, Solti I. Li Q, et al. BMC Med Inform Decis Mak. 2013 Apr 24;13:53. doi: 10.1186/1472-6947-13-53. BMC Med Inform Decis Mak. 2013. PMID: 23617267 Free PMC article.
Microarray analysis of active cardiac remodeling genes in a familial hypertrophic cardiomyopathy mouse model rescued by a phospholamban knockout.
Rajan S, Pena JR, Jegga AG, Aronow BJ, Wolska BM, Wieczorek DF. Rajan S, et al. Physiol Genomics. 2013 Sep 3;45(17):764-73. doi: 10.1152/physiolgenomics.00023.2013. Epub 2013 Jun 25. Physiol Genomics. 2013. PMID: 23800848 Free PMC article.
Computational approaches for human disease gene prediction and ranking.
Zhu C, Wu C, Aronow BJ, Jegga AG. Zhu C, et al. Adv Exp Med Biol. 2014;799:69-84. doi: 10.1007/978-1-4614-8778-4_4. Adv Exp Med Biol. 2014. PMID: 24292962 Review.
Concept Modeling-based Drug Repositioning.
Patchala J, Jegga AG. Patchala J, et al. AMIA Jt Summits Transl Sci Proc. 2015 Mar 23;2015:222-6. eCollection 2015. AMIA Jt Summits Transl Sci Proc. 2015. PMID: 26306277 Free PMC article.
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