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Specifying RNA-Binding Regions in Proteins by Peptide Cross-Linking and Affinity Purification.
Mullari M, Lyon D, Jensen LJ, Nielsen ML. Mullari M, et al. Among authors: jensen lj. J Proteome Res. 2017 Aug 4;16(8):2762-2772. doi: 10.1021/acs.jproteome.7b00042. Epub 2017 Jul 7. J Proteome Res. 2017. PMID: 28648085
Sequence-based feature prediction and annotation of proteins.
Juncker AS, Jensen LJ, Pierleoni A, Bernsel A, Tress ML, Bork P, von Heijne G, Valencia A, Ouzounis CA, Casadio R, Brunak S. Juncker AS, et al. Among authors: jensen lj. Genome Biol. 2009 Feb 2;10(2):206. doi: 10.1186/gb-2009-10-2-206. Genome Biol. 2009. PMID: 19226438 Free PMC article.
Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
Olsen JV, Vermeulen M, Santamaria A, Kumar C, Miller ML, Jensen LJ, Gnad F, Cox J, Jensen TS, Nigg EA, Brunak S, Mann M. Olsen JV, et al. Among authors: jensen lj, jensen ts. Sci Signal. 2010 Jan 12;3(104):ra3. doi: 10.1126/scisignal.2000475. Sci Signal. 2010. PMID: 20068231
Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level.
Danielsen JM, Sylvestersen KB, Bekker-Jensen S, Szklarczyk D, Poulsen JW, Horn H, Jensen LJ, Mailand N, Nielsen ML. Danielsen JM, et al. Among authors: jensen lj. Mol Cell Proteomics. 2011 Mar;10(3):M110.003590. doi: 10.1074/mcp.M110.003590. Epub 2010 Dec 7. Mol Cell Proteomics. 2011. PMID: 21139048 Free PMC article.
Proteome-wide mapping of the Drosophila acetylome demonstrates a high degree of conservation of lysine acetylation.
Weinert BT, Wagner SA, Horn H, Henriksen P, Liu WR, Olsen JV, Jensen LJ, Choudhary C. Weinert BT, et al. Among authors: jensen lj. Sci Signal. 2011 Jul 26;4(183):ra48. doi: 10.1126/scisignal.2001902. Sci Signal. 2011. PMID: 21791702
In vivo phosphoproteomics analysis reveals the cardiac targets of β-adrenergic receptor signaling.
Lundby A, Andersen MN, Steffensen AB, Horn H, Kelstrup CD, Francavilla C, Jensen LJ, Schmitt N, Thomsen MB, Olsen JV. Lundby A, et al. Among authors: jensen lj. Sci Signal. 2013 Jun 4;6(278):rs11. doi: 10.1126/scisignal.2003506. Sci Signal. 2013. PMID: 23737553
Protein-driven inference of miRNA-disease associations.
Mørk S, Pletscher-Frankild S, Palleja Caro A, Gorodkin J, Jensen LJ. Mørk S, et al. Among authors: jensen lj. Bioinformatics. 2014 Feb 1;30(3):392-7. doi: 10.1093/bioinformatics/btt677. Epub 2013 Nov 21. Bioinformatics. 2014. PMID: 24273243 Free PMC article.
Proteomic analysis of arginine methylation sites in human cells reveals dynamic regulation during transcriptional arrest.
Sylvestersen KB, Horn H, Jungmichel S, Jensen LJ, Nielsen ML. Sylvestersen KB, et al. Among authors: jensen lj. Mol Cell Proteomics. 2014 Aug;13(8):2072-88. doi: 10.1074/mcp.O113.032748. Epub 2014 Feb 21. Mol Cell Proteomics. 2014. PMID: 24563534 Free PMC article.
Predicting kinase activity in angiotensin receptor phosphoproteomes based on sequence-motifs and interactions.
Bøgebo R, Horn H, Olsen JV, Gammeltoft S, Jensen LJ, Hansen JL, Christensen GL. Bøgebo R, et al. Among authors: jensen lj. PLoS One. 2014 Apr 10;9(4):e94672. doi: 10.1371/journal.pone.0094672. eCollection 2014. PLoS One. 2014. PMID: 24722691 Free PMC article.
A comparison of protein kinases inhibitor screening methods using both enzymatic activity and binding affinity determination.
Rudolf AF, Skovgaard T, Knapp S, Jensen LJ, Berthelsen J. Rudolf AF, et al. Among authors: jensen lj. PLoS One. 2014 Jun 10;9(6):e98800. doi: 10.1371/journal.pone.0098800. eCollection 2014. PLoS One. 2014. PMID: 24915177 Free PMC article.
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