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STAR: ultrafast universal RNA-seq aligner.
Dobin A, Davis CA, Schlesinger F, Drenkow J, Zaleski C, Jha S, Batut P, Chaisson M, Gingeras TR. Dobin A, et al. Among authors: jha s. Bioinformatics. 2013 Jan 1;29(1):15-21. doi: 10.1093/bioinformatics/bts635. Epub 2012 Oct 25. Bioinformatics. 2013. PMID: 23104886 Free PMC article.
Comparative analysis of the transcriptome across distant species.
Gerstein MB, Rozowsky J, Yan KK, Wang D, Cheng C, Brown JB, Davis CA, Hillier L, Sisu C, Li JJ, Pei B, Harmanci AO, Duff MO, Djebali S, Alexander RP, Alver BH, Auerbach R, Bell K, Bickel PJ, Boeck ME, Boley NP, Booth BW, Cherbas L, Cherbas P, Di C, Dobin A, Drenkow J, Ewing B, Fang G, Fastuca M, Feingold EA, Frankish A, Gao G, Good PJ, Guigó R, Hammonds A, Harrow J, Hoskins RA, Howald C, Hu L, Huang H, Hubbard TJ, Huynh C, Jha S, Kasper D, Kato M, Kaufman TC, Kitchen RR, Ladewig E, Lagarde J, Lai E, Leng J, Lu Z, MacCoss M, May G, McWhirter R, Merrihew G, Miller DM, Mortazavi A, Murad R, Oliver B, Olson S, Park PJ, Pazin MJ, Perrimon N, Pervouchine D, Reinke V, Reymond A, Robinson G, Samsonova A, Saunders GI, Schlesinger F, Sethi A, Slack FJ, Spencer WC, Stoiber MH, Strasbourger P, Tanzer A, Thompson OA, Wan KH, Wang G, Wang H, Watkins KL, Wen J, Wen K, Xue C, Yang L, Yip K, Zaleski C, Zhang Y, Zheng H, Brenner SE, Graveley BR, Celniker SE, Gingeras TR, Waterston R. Gerstein MB, et al. Among authors: jha s. Nature. 2014 Aug 28;512(7515):445-8. doi: 10.1038/nature13424. Nature. 2014. PMID: 25164755 Free PMC article.
Landscape of transcription in human cells.
Djebali S, Davis CA, Merkel A, Dobin A, Lassmann T, Mortazavi A, Tanzer A, Lagarde J, Lin W, Schlesinger F, Xue C, Marinov GK, Khatun J, Williams BA, Zaleski C, Rozowsky J, Röder M, Kokocinski F, Abdelhamid RF, Alioto T, Antoshechkin I, Baer MT, Bar NS, Batut P, Bell K, Bell I, Chakrabortty S, Chen X, Chrast J, Curado J, Derrien T, Drenkow J, Dumais E, Dumais J, Duttagupta R, Falconnet E, Fastuca M, Fejes-Toth K, Ferreira P, Foissac S, Fullwood MJ, Gao H, Gonzalez D, Gordon A, Gunawardena H, Howald C, Jha S, Johnson R, Kapranov P, King B, Kingswood C, Luo OJ, Park E, Persaud K, Preall JB, Ribeca P, Risk B, Robyr D, Sammeth M, Schaffer L, See LH, Shahab A, Skancke J, Suzuki AM, Takahashi H, Tilgner H, Trout D, Walters N, Wang H, Wrobel J, Yu Y, Ruan X, Hayashizaki Y, Harrow J, Gerstein M, Hubbard T, Reymond A, Antonarakis SE, Hannon G, Giddings MC, Ruan Y, Wold B, Carninci P, Guigó R, Gingeras TR. Djebali S, et al. Among authors: jha s. Nature. 2012 Sep 6;489(7414):101-8. doi: 10.1038/nature11233. Nature. 2012. PMID: 22955620 Free PMC article.
Because RNA represents the direct output of the genetic information encoded by genomes and a significant proportion of a cell's regulatory capabilities are focused on its synthesis, processing, transport, modification and translation, the generation of such a catalogue is …
Because RNA represents the direct output of the genetic information encoded by genomes and a significant proportion of a cell's regul …
Enhanced oral bioavailability of an etoposide multiple nanoemulsion incorporating a deoxycholic acid derivative-lipid complex.
Jha SK, Han HS, Subedi L, Pangeni R, Chung JY, Kweon S, Choi JU, Byun Y, Kim YH, Park JW. Jha SK, et al. Drug Deliv. 2020 Dec;27(1):1501-1513. doi: 10.1080/10717544.2020.1837293. Drug Deliv. 2020. PMID: 33107339
Programmatic norms change to eliminate violence against children: Insights for practitioners and researchers from a UNICEF global mapping study.
Cookson TP, Fuentes L, Saxena AS, Jha S. Cookson TP, et al. Among authors: jha s. Glob Public Health. 2020 Oct 26:1-12. doi: 10.1080/17441692.2020.1839931. Online ahead of print. Glob Public Health. 2020. PMID: 33106092
Multi-platform optical remote sensing dataset for target detection.
Jha SS, Kumar M, Nidamanuri RR. Jha SS, et al. Data Brief. 2020 Oct 1;33:106362. doi: 10.1016/j.dib.2020.106362. eCollection 2020 Dec. Data Brief. 2020. PMID: 33088874 Free PMC article.
A phylogenetic analysis of Momordica (Cucurbitaceae) in India based on karyo-morphology, nuclear DNA content and rDNA ITS1-5.8S-ITS2 sequences.
Ghosh I, Saha PS, Bhowmick BK, Jha S. Ghosh I, et al. Among authors: jha s. Protoplasma. 2020 Oct 20. doi: 10.1007/s00709-020-01576-z. Online ahead of print. Protoplasma. 2020. PMID: 33083915
Elders suffering recurrent injurious falls: causal analysis from a rural tribal community in the eastern part of India.
Lahiri A, Jha SS, Chakraborty A. Lahiri A, et al. Among authors: jha ss. Rural Remote Health. 2020 Oct;20(4):6042. doi: 10.22605/RRH6042. Epub 2020 Oct 21. Rural Remote Health. 2020. PMID: 33081484 Free article.
Neuropsychologic symptoms of primary hyperparathyroidism: Are we providing enough attention?
Jha S, Jha CK, Singh PK. Jha S, et al. Surgery. 2020 Oct 16:S0039-6060(20)30604-8. doi: 10.1016/j.surg.2020.08.037. Online ahead of print. Surgery. 2020. PMID: 33077196 No abstract available.
The Milan System for Reporting Salivary Gland Cytopathology: Assessment of Cytohistological Concordance and Risk of Malignancy.
Jha S, Mitra S, Purkait S, Adhya AK. Jha S, et al. Acta Cytol. 2020 Oct 12:1-13. doi: 10.1159/000510720. Online ahead of print. Acta Cytol. 2020. PMID: 33045705
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