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Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure.
López-Labrador FX, Brown JR, Fischer N, Harvala H, Van Boheemen S, Cinek O, Sayiner A, Madsen TV, Auvinen E, Kufner V, Huber M, Rodriguez C, Jonges M, Hönemann M, Susi P, Sousa H, Klapper PE, Pérez-Cataluňa A, Hernandez M, Molenkamp R, der Hoek LV, Schuurman R, Couto N, Leuzinger K, Simmonds P, Beer M, Höper D, Kamminga S, Feltkamp MCW, Rodríguez-Díaz J, Keyaerts E, Nielsen XC, Puchhammer-Stöckl E, Kroes ACM, Buesa J, Breuer J, Claas ECJ, de Vries JJC; ESCV Network on Next-Generation Sequencing. López-Labrador FX, et al. Among authors: jonges m. J Clin Virol. 2021 Jan;134:104691. doi: 10.1016/j.jcv.2020.104691. Epub 2020 Nov 18. J Clin Virol. 2021. PMID: 33278791 Free article.
Evaluation of a rapid molecular algorithm for detection of pandemic influenza A (H1N1) 2009 virus and screening for a key oseltamivir resistance (H275Y) substitution in neuraminidase.
van der Vries E, Jonges M, Herfst S, Maaskant J, Van der Linden A, Guldemeester J, Aron GI, Bestebroer TM, Koopmans M, Meijer A, Fouchier RA, Osterhaus AD, Boucher CA, Schutten M. van der Vries E, et al. Among authors: jonges m. J Clin Virol. 2010 Jan;47(1):34-7. doi: 10.1016/j.jcv.2009.09.030. Epub 2009 Oct 25. J Clin Virol. 2010. PMID: 19857993 Free PMC article.
Introduction of virulence markers in PB2 of pandemic swine-origin influenza virus does not result in enhanced virulence or transmission.
Herfst S, Chutinimitkul S, Ye J, de Wit E, Munster VJ, Schrauwen EJ, Bestebroer TM, Jonges M, Meijer A, Koopmans M, Rimmelzwaan GF, Osterhaus AD, Perez DR, Fouchier RA. Herfst S, et al. Among authors: jonges m. J Virol. 2010 Apr;84(8):3752-8. doi: 10.1128/JVI.02634-09. Epub 2010 Feb 3. J Virol. 2010. PMID: 20130063 Free PMC article.
Supplementing SARS-CoV-2 genomic surveillance with PCR-based variant detection for real-time actionable information, the Netherlands, June to July 2021.
Molenkamp R, Fanoy E, Derickx L, de Groot T, Jonges M, Leenstra T, Nijhuis R, Pas S, Vahidnia A, von Wintersdorff C, Mulder B, Koopmans M. Molenkamp R, et al. Among authors: jonges m. Euro Surveill. 2021 Oct;26(40):2100921. doi: 10.2807/1560-7917.ES.2021.26.40.2100921. Euro Surveill. 2021. PMID: 34622759 Free PMC article.
Mpox outbreak among men who have sex with men in Amsterdam and Rotterdam, the Netherlands: no evidence for undetected transmission prior to May 2022, a retrospective study.
de Vries HJ, Götz HM, Bruisten S, van der Eijk AA, Prins M, Oude Munnink BB, Welkers MR, Jonges M, Molenkamp R, Westerhuis BM, Schuele L, Stam A, Boter M, Hoornenborg E, Mulders D, van den Lubben M, Koopmans M. de Vries HJ, et al. Among authors: jonges m. Euro Surveill. 2023 Apr;28(17):2200869. doi: 10.2807/1560-7917.ES.2023.28.17.2200869. Euro Surveill. 2023. PMID: 37103788 Free PMC article.
Circulation, viral diversity and genomic rearrangement in mpox virus in the Netherlands during the 2022 outbreak and beyond.
Schuele L, Boter M, Nieuwenhuijse DF, Götz H, Fanoy E, de Vries H, Vieyra B, Bavalia R, Hoornenborg E, Molenkamp R, Jonges M, van den Ouden A, Simões M, van den Lubben M, Koopmans M, Welkers MRA, Oude Munnink BB. Schuele L, et al. Among authors: jonges m. J Med Virol. 2024 Jan;96(1):e29397. doi: 10.1002/jmv.29397. J Med Virol. 2024. PMID: 38235923
Virulence-associated substitution D222G in the hemagglutinin of 2009 pandemic influenza A(H1N1) virus affects receptor binding.
Chutinimitkul S, Herfst S, Steel J, Lowen AC, Ye J, van Riel D, Schrauwen EJ, Bestebroer TM, Koel B, Burke DF, Sutherland-Cash KH, Whittleston CS, Russell CA, Wales DJ, Smith DJ, Jonges M, Meijer A, Koopmans M, Rimmelzwaan GF, Kuiken T, Osterhaus AD, García-Sastre A, Perez DR, Fouchier RA. Chutinimitkul S, et al. Among authors: jonges m. J Virol. 2010 Nov;84(22):11802-13. doi: 10.1128/JVI.01136-10. Epub 2010 Sep 15. J Virol. 2010. PMID: 20844044 Free PMC article.
47 results