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Differential spatial and structural organization of the X chromosome underlies dosage compensation in C. elegans.
Sharma R, Jost D, Kind J, Gómez-Saldivar G, van Steensel B, Askjaer P, Vaillant C, Meister P. Sharma R, et al. Genes Dev. 2014 Dec 1;28(23):2591-6. doi: 10.1101/gad.248864.114. Genes Dev. 2014. PMID: 25452271 Free PMC article.
Bifurcation in epigenetics: implications in development, proliferation, and diseases.
Jost D. Jost D. Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Jan;89(1):010701. doi: 10.1103/PhysRevE.89.010701. Epub 2014 Jan 23. Phys Rev E Stat Nonlin Soft Matter Phys. 2014. PMID: 24580158
The folding landscape of the epigenome.
Olarte-Plata JD, Haddad N, Vaillant C, Jost D. Olarte-Plata JD, et al. Phys Biol. 2016 Apr 4;13(2):026001. doi: 10.1088/1478-3975/13/2/026001. Phys Biol. 2016. PMID: 27042992
Coupling 1D modifications and 3D nuclear organization: data, models and function.
Jost D, Vaillant C, Meister P. Jost D, et al. Curr Opin Cell Biol. 2017 Feb;44:20-27. doi: 10.1016/j.ceb.2016.12.001. Epub 2016 Dec 29. Curr Opin Cell Biol. 2017. PMID: 28040646 Review.
IC-Finder: inferring robustly the hierarchical organization of chromatin folding.
Haddad N, Vaillant C, Jost D. Haddad N, et al. Nucleic Acids Res. 2017 Jun 2;45(10):e81. doi: 10.1093/nar/gkx036. Nucleic Acids Res. 2017. PMID: 28130423 Free PMC article.
The software is available at http://membres-timc.imag.fr/Daniel.Jost/DJ-TIMC/Software.html....
The software is available at http://membres-timc.imag.fr/Daniel.Jost/DJ-TIMC/Software.html....
Global chromatin conformation differences in the Drosophila dosage compensated chromosome X.
Pal K, Forcato M, Jost D, Sexton T, Vaillant C, Salviato E, Mazza EMC, Lugli E, Cavalli G, Ferrari F. Pal K, et al. Nat Commun. 2019 Nov 25;10(1):5355. doi: 10.1038/s41467-019-13350-8. Nat Commun. 2019. PMID: 31767860 Free PMC article.
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