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Table representation of search results timeline featuring number of search results per year.
Year | Number of Results |
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2019 | 1 |
2020 | 2 |
2021 | 1 |
2022 | 2 |
2024 | 1 |
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6 results
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Page 1
Evaluation and optimization of sequence-based gene regulatory deep learning models.
bioRxiv [Preprint]. 2024 Feb 17:2023.04.26.538471. doi: 10.1101/2023.04.26.538471.
bioRxiv. 2024.
PMID: 38405704
Free PMC article.
Preprint.
Prioritization of autoimmune disease-associated genetic variants that perturb regulatory element activity in T cells.
Mouri K, Guo MH, de Boer CG, Lissner MM, Harten IA, Newby GA, DeBerg HA, Platt WF, Gentili M, Liu DR, Campbell DJ, Hacohen N, Tewhey R, Ray JP.
Mouri K, et al.
Nat Genet. 2022 May;54(5):603-612. doi: 10.1038/s41588-022-01056-5. Epub 2022 May 5.
Nat Genet. 2022.
PMID: 35513721
Free PMC article.
Item in Clipboard
The evolution, evolvability and engineering of gene regulatory DNA.
Vaishnav ED, de Boer CG, Molinet J, Yassour M, Fan L, Adiconis X, Thompson DA, Levin JZ, Cubillos FA, Regev A.
Vaishnav ED, et al.
Nature. 2022 Mar;603(7901):455-463. doi: 10.1038/s41586-022-04506-6. Epub 2022 Mar 9.
Nature. 2022.
PMID: 35264797
Free PMC article.
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Global discovery of lupus genetic risk variant allelic enhancer activity.
Lu X, Chen X, Forney C, Donmez O, Miller D, Parameswaran S, Hong T, Huang Y, Pujato M, Cazares T, Miraldi ER, Ray JP, de Boer CG, Harley JB, Weirauch MT, Kottyan LC.
Lu X, et al.
Nat Commun. 2021 Mar 12;12(1):1611. doi: 10.1038/s41467-021-21854-5.
Nat Commun. 2021.
PMID: 33712590
Free PMC article.
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Prioritizing disease and trait causal variants at the TNFAIP3 locus using functional and genomic features.
Ray JP, de Boer CG, Fulco CP, Lareau CA, Kanai M, Ulirsch JC, Tewhey R, Ludwig LS, Reilly SK, Bergman DT, Engreitz JM, Issner R, Finucane HK, Lander ES, Regev A, Hacohen N.
Ray JP, et al.
Nat Commun. 2020 Mar 6;11(1):1237. doi: 10.1038/s41467-020-15022-4.
Nat Commun. 2020.
PMID: 32144282
Free PMC article.
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Deciphering eukaryotic gene-regulatory logic with 100 million random promoters.
de Boer CG, Vaishnav ED, Sadeh R, Abeyta EL, Friedman N, Regev A.
de Boer CG, et al.
Nat Biotechnol. 2020 Jan;38(1):56-65. doi: 10.1038/s41587-019-0315-8. Epub 2019 Dec 2.
Nat Biotechnol. 2020.
PMID: 31792407
Free PMC article.
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