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285 results
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A knowledge base for predicting protein localization sites in eukaryotic cells.
Nakai K, Kanehisa M. Nakai K, et al. Among authors: kanehisa m. Genomics. 1992 Dec;14(4):897-911. doi: 10.1016/s0888-7543(05)80111-9. Genomics. 1992. PMID: 1478671 Free PMC article.
KEGG Bioinformatics Resource for Plant Genomics and Metabolomics.
Kanehisa M. Kanehisa M. Methods Mol Biol. 2016;1374:55-70. doi: 10.1007/978-1-4939-3167-5_3. Methods Mol Biol. 2016. PMID: 26519400
Evaluation method for the potential functionome harbored in the genome and metagenome.
Takami H, Taniguchi T, Moriya Y, Kuwahara T, Kanehisa M, Goto S. Takami H, et al. Among authors: kanehisa m. BMC Genomics. 2012 Dec 12;13:699. doi: 10.1186/1471-2164-13-699. BMC Genomics. 2012. PMID: 23234305 Free PMC article.
DINIES: drug-target interaction network inference engine based on supervised analysis.
Yamanishi Y, Kotera M, Moriya Y, Sawada R, Kanehisa M, Goto S. Yamanishi Y, et al. Among authors: kanehisa m. Nucleic Acids Res. 2014 Jul;42(Web Server issue):W39-45. doi: 10.1093/nar/gku337. Epub 2014 May 16. Nucleic Acids Res. 2014. PMID: 24838565 Free PMC article.
Data, information, knowledge and principle: back to metabolism in KEGG.
Kanehisa M, Goto S, Sato Y, Kawashima M, Furumichi M, Tanabe M. Kanehisa M, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D199-205. doi: 10.1093/nar/gkt1076. Epub 2013 Nov 7. Nucleic Acids Res. 2014. PMID: 24214961 Free PMC article.
Characterization of relationships between transcriptional units and operon structures in Bacillus subtilis and Escherichia coli.
Okuda S, Kawashima S, Kobayashi K, Ogasawara N, Kanehisa M, Goto S. Okuda S, et al. Among authors: kanehisa m. BMC Genomics. 2007 Feb 13;8:48. doi: 10.1186/1471-2164-8-48. BMC Genomics. 2007. PMID: 17298663 Free PMC article.
Systematic analysis of enzyme-catalyzed reaction patterns and prediction of microbial biodegradation pathways.
Oh M, Yamada T, Hattori M, Goto S, Kanehisa M. Oh M, et al. Among authors: kanehisa m. J Chem Inf Model. 2007 Jul-Aug;47(4):1702-12. doi: 10.1021/ci700006f. Epub 2007 May 22. J Chem Inf Model. 2007. PMID: 17516640
Prediction of nitrogen metabolism-related genes in Anabaena by kernel-based network analysis.
Okamoto S, Yamanishi Y, Ehira S, Kawashima S, Tonomura K, Kanehisa M. Okamoto S, et al. Among authors: kanehisa m. Proteomics. 2007 Mar;7(6):900-9. doi: 10.1002/pmic.200600862. Proteomics. 2007. PMID: 17370268
The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships.
Sato T, Yamanishi Y, Kanehisa M, Toh H. Sato T, et al. Among authors: kanehisa m. Bioinformatics. 2005 Sep 1;21(17):3482-9. doi: 10.1093/bioinformatics/bti564. Epub 2005 Jun 30. Bioinformatics. 2005. PMID: 15994190
The evolutionary repertoires of the eukaryotic-type ABC transporters in terms of the phylogeny of ATP-binding domains in eukaryotes and prokaryotes.
Igarashi Y, Aoki KF, Mamitsuka H, Kuma K, Kanehisa M. Igarashi Y, et al. Among authors: kanehisa m. Mol Biol Evol. 2004 Nov;21(11):2149-60. doi: 10.1093/molbev/msh226. Epub 2004 Aug 5. Mol Biol Evol. 2004. PMID: 15297601
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