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Expert system for predicting protein localization sites in gram-negative bacteria.
Nakai K, Kanehisa M. Nakai K, et al. Among authors: kanehisa m. Proteins. 1991;11(2):95-110. doi: 10.1002/prot.340110203. Proteins. 1991. PMID: 1946347
Prediction of glycan structures from gene expression data based on glycosyltransferase reactions.
Kawano S, Hashimoto K, Miyama T, Goto S, Kanehisa M. Kawano S, et al. Among authors: kanehisa m. Bioinformatics. 2005 Nov 1;21(21):3976-82. doi: 10.1093/bioinformatics/bti666. Epub 2005 Sep 13. Bioinformatics. 2005. PMID: 16159923
An improved scoring scheme for predicting glycan structures from gene expression data.
Suga A, Yamanishi Y, Hashimoto K, Goto S, Kanehisa M. Suga A, et al. Among authors: kanehisa m. Genome Inform. 2007;18:237-46. Genome Inform. 2007. PMID: 18546491
New amino acid indices based on residue network topology.
Huang J, Kawashima S, Kanehisa M. Huang J, et al. Among authors: kanehisa m. Genome Inform. 2007;18:152-61. Genome Inform. 2007. PMID: 18546483
Predicting B cell epitope residues with network topology based amino acid indices.
Huang J, Honda W, Kanehisa M. Huang J, et al. Among authors: kanehisa m. Genome Inform. 2007;19:40-9. Genome Inform. 2007. PMID: 18546503
Systematic analysis of enzyme-catalyzed reaction patterns and prediction of microbial biodegradation pathways.
Oh M, Yamada T, Hattori M, Goto S, Kanehisa M. Oh M, et al. Among authors: kanehisa m. J Chem Inf Model. 2007 Jul-Aug;47(4):1702-12. doi: 10.1021/ci700006f. Epub 2007 May 22. J Chem Inf Model. 2007. PMID: 17516640
Comparative analysis of DNA-binding proteins between thermophilic and mesophilic bacteria.
Fujita M, Kanehisa M. Fujita M, et al. Among authors: kanehisa m. Genome Inform. 2005;16(1):174-81. Genome Inform. 2005. PMID: 16362920
Fast and accurate database homology search using upper bounds of local alignment scores.
Itoh M, Goto S, Akutsu T, Kanehisa M. Itoh M, et al. Among authors: kanehisa m. Bioinformatics. 2005 Apr 1;21(7):912-21. doi: 10.1093/bioinformatics/bti076. Epub 2004 Oct 27. Bioinformatics. 2005. PMID: 15509606
Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs.
Park KJ, Kanehisa M. Park KJ, et al. Among authors: kanehisa m. Bioinformatics. 2003 Sep 1;19(13):1656-63. doi: 10.1093/bioinformatics/btg222. Bioinformatics. 2003. PMID: 12967962
Tandem clusters of membrane proteins in complete genome sequences.
Kihara D, Kanehisa M. Kihara D, et al. Among authors: kanehisa m. Genome Res. 2000 Jun;10(6):731-43. doi: 10.1101/gr.10.6.731. Genome Res. 2000. PMID: 10854407
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