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CRAVAT: cancer-related analysis of variants toolkit.
Douville C, Carter H, Kim R, Niknafs N, Diekhans M, Stenson PD, Cooper DN, Ryan M, Karchin R. Douville C, et al. Among authors: karchin r. Bioinformatics. 2013 Mar 1;29(5):647-8. doi: 10.1093/bioinformatics/btt017. Epub 2013 Jan 16. Bioinformatics. 2013. PMID: 23325621 Free PMC article.
Using bioinformatics to predict the functional impact of SNVs.
Cline MS, Karchin R. Cline MS, et al. Among authors: karchin r. Bioinformatics. 2011 Feb 15;27(4):441-8. doi: 10.1093/bioinformatics/btq695. Epub 2010 Dec 15. Bioinformatics. 2011. PMID: 21159622 Free PMC article. Review.
PREDICT-2ND: a tool for generalized protein local structure prediction.
Katzman S, Barrett C, Thiltgen G, Karchin R, Karplus K. Katzman S, et al. Among authors: karchin r. Bioinformatics. 2008 Nov 1;24(21):2453-9. doi: 10.1093/bioinformatics/btn438. Epub 2008 Aug 30. Bioinformatics. 2008. PMID: 18757875 Free PMC article.
124 results