Katoh K - Search Results

1

MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Katoh K, Standley DM. Katoh K, et al. Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16. Mol Biol Evol. 2013. PMID: 23329690 Free PMC article.

2

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.

Katoh K, Misawa K, Kuma K, Miyata T. Katoh K, et al. Nucleic Acids Res. 2002 Jul 15;30(14):3059-66. doi: 10.1093/nar/gkf436. Nucleic Acids Res. 2002. PMID: 12136088 Free PMC article.

3

Cyclostome hemoglobins are possibly paralogous to gnathostome hemoglobins.

Katoh K, Miyata T. Katoh K, et al. J Mol Evol. 2002 Aug;55(2):246-9. doi: 10.1007/s00239-002-2319-z. J Mol Evol. 2002. PMID: 12150152 No abstract available.

4

MAFFT version 5: improvement in accuracy of multiple sequence alignment.

Katoh K, Kuma K, Toh H, Miyata T. Katoh K, et al. Nucleic Acids Res. 2005 Jan 20;33(2):511-8. doi: 10.1093/nar/gki198. Print 2005. Nucleic Acids Res. 2005. PMID: 15661851 Free PMC article.

5

Improvement in the accuracy of multiple sequence alignment program MAFFT.

Katoh K, Kuma K, Miyata T, Toh H. Katoh K, et al. Genome Inform. 2005;16(1):22-33. Genome Inform. 2005. PMID: 16362903

6

PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences.

Katoh K, Toh H. Katoh K, et al. Bioinformatics. 2007 Feb 1;23(3):372-4. doi: 10.1093/bioinformatics/btl592. Epub 2006 Nov 21. Bioinformatics. 2007. PMID: 17118958

7

Molecular evolution of arthropod color vision deduced from multiple opsin genes of jumping spiders.

Koyanagi M, Nagata T, Katoh K, Yamashita S, Tokunaga F. Koyanagi M, et al. Among authors: katoh k. J Mol Evol. 2008 Feb;66(2):130-7. doi: 10.1007/s00239-008-9065-9. Epub 2008 Jan 24. J Mol Evol. 2008. PMID: 18217181

8

Recent developments in the MAFFT multiple sequence alignment program.

Katoh K, Toh H. Katoh K, et al. Brief Bioinform. 2008 Jul;9(4):286-98. doi: 10.1093/bib/bbn013. Epub 2008 Mar 27. Brief Bioinform. 2008. PMID: 18372315

9

Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework.

Katoh K, Toh H. Katoh K, et al. BMC Bioinformatics. 2008 Apr 25;9:212. doi: 10.1186/1471-2105-9-212. BMC Bioinformatics. 2008. PMID: 18439255 Free PMC article.

10

Protein multiple sequence alignment.

Do CB, Katoh K. Do CB, et al. Among authors: katoh k. Methods Mol Biol. 2008;484:379-413. doi: 10.1007/978-1-59745-398-1_25. Methods Mol Biol. 2008. PMID: 18592193 Review.

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