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Gene cloning and characterization of the very large NAD-dependent l-glutamate dehydrogenase from the psychrophile Janthinobacterium lividum, isolated from cold soil.
Kawakami R, Sakuraba H, Ohshima T. Kawakami R, et al. J Bacteriol. 2007 Aug;189(15):5626-33. doi: 10.1128/JB.00496-07. Epub 2007 May 25. J Bacteriol. 2007. PMID: 17526698 Free PMC article.
Identification of catalytic residues of a very large NAD-glutamate dehydrogenase from Janthinobacterium lividum by site-directed mutagenesis.
Kawakami R, Sakuraba H, Ohshima T. Kawakami R, et al. Biosci Biotechnol Biochem. 2014;78(12):2045-50. doi: 10.1080/09168451.2014.946394. Epub 2014 Aug 15. Biosci Biotechnol Biochem. 2014. PMID: 25126984
Refolding, characterization and crystal structure of (S)-malate dehydrogenase from the hyperthermophilic archaeon Aeropyrum pernix.
Kawakami R, Sakuraba H, Goda S, Tsuge H, Ohshima T. Kawakami R, et al. Biochim Biophys Acta. 2009 Oct;1794(10):1496-504. doi: 10.1016/j.bbapap.2009.06.014. Epub 2009 Jun 23. Biochim Biophys Acta. 2009. PMID: 19555779
Gene expression and characterization of 2-keto-3-deoxygluconate kinase, a key enzyme in the modified Entner-Doudoroff pathway of the aerobic and acidophilic hyperthermophile Sulfolobus tokodaii.
Ohshima T, Kawakami R, Kanai Y, Goda S, Sakuraba H. Ohshima T, et al. Protein Expr Purif. 2007 Jul;54(1):73-8. doi: 10.1016/j.pep.2007.02.013. Epub 2007 Feb 28. Protein Expr Purif. 2007. PMID: 17407821
The first archaeal L-aspartate dehydrogenase from the hyperthermophile Archaeoglobus fulgidus: gene cloning and enzymological characterization.
Yoneda K, Kawakami R, Tagashira Y, Sakuraba H, Goda S, Ohshima T. Yoneda K, et al. Biochim Biophys Acta. 2006 Jun;1764(6):1087-93. doi: 10.1016/j.bbapap.2006.04.006. Epub 2006 Apr 21. Biochim Biophys Acta. 2006. PMID: 16731057
The enzyme showed pro-R (A-type) stereospecificity for hydrogen transfer from the C4 position of the nicotinamide moiety of NADH. ...
The enzyme showed pro-R (A-type) stereospecificity for hydrogen transfer from the C4 position of the nicotinamide moiety of NADH. ...
Intersubunit interaction induced by subunit rearrangement is essential for the catalytic activity of the hyperthermophilic glutamate dehydrogenase from Pyrobaculum islandicum.
Goda S, Kojima M, Nishikawa Y, Kujo C, Kawakami R, Kuramitsu S, Sakuraba H, Hiragi Y, Ohshima T. Goda S, et al. Biochemistry. 2005 Nov 22;44(46):15304-13. doi: 10.1021/bi050478l. Biochemistry. 2005. PMID: 16285734
Small-angle X-ray scattering measurements revealed that the radius of gyration (R(g,z)) of the hexameric recombinant enzyme was reduced to 47 A from 55 A by either heat or urea, and that the final structure of the active enzyme is the same irrespective of the mechanism of …
Small-angle X-ray scattering measurements revealed that the radius of gyration (R(g,z)) of the hexameric recombinant enzyme was reduc …
First archaeal inorganic polyphosphate/ATP-dependent NAD kinase, from hyperthermophilic archaeon Pyrococcus horikoshii: cloning, expression, and characterization.
Sakuraba H, Kawakami R, Ohshima T. Sakuraba H, et al. Appl Environ Microbiol. 2005 Aug;71(8):4352-8. doi: 10.1128/AEM.71.8.4352-4358.2005. Appl Environ Microbiol. 2005. PMID: 16085824 Free PMC article.
L-Threonine dehydrogenase from the hyperthermophilic archaeon Pyrococcus horikoshii OT3: gene cloning and enzymatic characterization.
Shimizu Y, Sakuraba H, Kawakami R, Goda S, Kawarabayasi Y, Ohshima T. Shimizu Y, et al. Extremophiles. 2005 Aug;9(4):317-24. doi: 10.1007/s00792-005-0447-2. Epub 2005 May 18. Extremophiles. 2005. PMID: 15902509
The enzyme showed pro-R stereospecificity for hydrogen transfer at the C4 position of the nicotinamide moiety of NADH. This is the first description of the characteristics of an L-threonine dehydrogenase from the archaea domain....
The enzyme showed pro-R stereospecificity for hydrogen transfer at the C4 position of the nicotinamide moiety of NADH. This is the fi …
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