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A library of protein surface patches discriminates between native structures and decoys generated by structure prediction servers.
Gamliel R, Kedem K, Kolodny R, Keasar C. Gamliel R, et al. Among authors: kedem k. BMC Struct Biol. 2011 May 4;11(1):20. doi: 10.1186/1472-6807-11-20. BMC Struct Biol. 2011. PMID: 21542935 Free PMC article.
A structure-based flexible search method for motifs in RNA.
Veksler-Lublinsky I, Ziv-Ukelson M, Barash D, Kedem K. Veksler-Lublinsky I, et al. Among authors: kedem k. J Comput Biol. 2007 Sep;14(7):908-26. doi: 10.1089/cmb.2007.0061. J Comput Biol. 2007. PMID: 17803370
FASH: A web application for nucleotides sequence search.
Veksler-Lublinksy I, Barash D, Avisar C, Troim E, Chew P, Kedem K. Veksler-Lublinksy I, et al. Among authors: kedem k. Source Code Biol Med. 2008 May 27;3:9. doi: 10.1186/1751-0473-3-9. Source Code Biol Med. 2008. PMID: 18505581 Free PMC article.
Finding quasi-modules of human and viral miRNAs: a case study of human cytomegalovirus (HCMV).
Veksler-Lublinsky I, Shemer-Avni Y, Meiri E, Bentwich Z, Kedem K, Ziv-Ukelson M. Veksler-Lublinsky I, et al. Among authors: kedem k. BMC Bioinformatics. 2012 Dec 3;13:322. doi: 10.1186/1471-2105-13-322. BMC Bioinformatics. 2012. PMID: 23206407 Free PMC article.
Gene bi-targeting by viral and human miRNAs.
Veksler-Lublinsky I, Shemer-Avni Y, Kedem K, Ziv-Ukelson M. Veksler-Lublinsky I, et al. Among authors: kedem k. BMC Bioinformatics. 2010 May 13;11:249. doi: 10.1186/1471-2105-11-249. BMC Bioinformatics. 2010. PMID: 20465802 Free PMC article.
Fast detection of common geometric substructure in proteins.
Chew LP, Huttenlocher D, Kedem K, Kleinberg J. Chew LP, et al. J Comput Biol. 1999 Fall-Winter;6(3-4):313-25. doi: 10.1089/106652799318292. J Comput Biol. 1999. PMID: 10582569
Comparative analysis of dendritic architecture of identified neurons using the Hausdorff distance metric.
Mizrahi A, Ben-Ner E, Katz MJ, Kedem K, Glusman JG, Libersat F. Mizrahi A, et al. J Comp Neurol. 2000 Jul 3;422(3):415-28. doi: 10.1002/1096-9861(20000703)422:3<415::aid-cne8>;2-t. J Comp Neurol. 2000. PMID: 10861517
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