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RNA regulons in cancer and inflammation.
Bisogno LS, Keene JD. Bisogno LS, et al. Among authors: keene jd. Curr Opin Genet Dev. 2018 Feb;48:97-103. doi: 10.1016/j.gde.2017.11.004. Epub 2017 Nov 22. Curr Opin Genet Dev. 2018. PMID: 29175729 Free PMC article. Review.
Coordinating expression of RNA binding proteins with their mRNA targets.
Jiang H, Xu L, Wang Z, Keene J, Gu Z. Jiang H, et al. Sci Rep. 2014 Nov 24;4:7175. doi: 10.1038/srep07175. Sci Rep. 2014. PMID: 25417751 Free PMC article.
A two-phase innate host response to alphavirus infection identified by mRNP-tagging in vivo.
Konopka JL, Penalva LO, Thompson JM, White LJ, Beard CW, Keene JD, Johnston RE. Konopka JL, et al. PLoS Pathog. 2007 Dec;3(12):e199. doi: 10.1371/journal.ppat.0030199. PLoS Pathog. 2007. PMID: 18215114 Free PMC article.
Quantifying RNA binding sites transcriptome-wide using DO-RIP-seq.
Nicholson CO, Friedersdorf M, Keene JD. Nicholson CO, et al. Among authors: keene jd. RNA. 2017 Jan;23(1):32-46. doi: 10.1261/rna.058115.116. Epub 2016 Oct 14. RNA. 2017. PMID: 27742911 Free PMC article.
Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability.
Mukherjee N, Corcoran DL, Nusbaum JD, Reid DW, Georgiev S, Hafner M, Ascano M Jr, Tuschl T, Ohler U, Keene JD. Mukherjee N, et al. Mol Cell. 2011 Aug 5;43(3):327-39. doi: 10.1016/j.molcel.2011.06.007. Epub 2011 Jun 30. Mol Cell. 2011. PMID: 21723170 Free PMC article.
Eukaryotic mRNPs may represent posttranscriptional operons.
Keene JD, Tenenbaum SA. Keene JD, et al. Mol Cell. 2002 Jun;9(6):1161-7. doi: 10.1016/s1097-2765(02)00559-2. Mol Cell. 2002. PMID: 12086614
The ribonome: a dominant force in co-ordinating gene expression.
Mansfield KD, Keene JD. Mansfield KD, et al. Biol Cell. 2009 Mar;101(3):169-81. doi: 10.1042/BC20080055. Biol Cell. 2009. PMID: 19152504 Free PMC article. Review.
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