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Binding of cephalothin and cefotaxime to D-ala-D-ala-peptidase reveals a functional basis of a natural mutation in a low-affinity penicillin-binding protein and in extended-spectrum beta-lactamases.
Kuzin AP, Liu H, Kelly JA, Knox JR. Kuzin AP, et al. Among authors: kelly ja. Biochemistry. 1995 Jul 25;34(29):9532-40. doi: 10.1021/bi00029a030. Biochemistry. 1995. PMID: 7626623
Inactivation of bacterial DD-peptidase by beta-sultams.
Llinás A, Ahmed N, Cordaro M, Laws AP, Frère JM, Delmarcelle M, Silvaggi NR, Kelly JA, Page MI. Llinás A, et al. Among authors: kelly ja. Biochemistry. 2005 May 31;44(21):7738-46. doi: 10.1021/bi050110o. Biochemistry. 2005. PMID: 15909988
Crystal structures of complexes between the R61 DD-peptidase and peptidoglycan-mimetic beta-lactams: a non-covalent complex with a "perfect penicillin".
Silvaggi NR, Josephine HR, Kuzin AP, Nagarajan R, Pratt RF, Kelly JA. Silvaggi NR, et al. Among authors: kelly ja. J Mol Biol. 2005 Jan 21;345(3):521-33. doi: 10.1016/j.jmb.2004.10.076. J Mol Biol. 2005. PMID: 15581896
Toward better antibiotics: crystallographic studies of a novel class of DD-peptidase/beta-lactamase inhibitors.
Silvaggi NR, Kaur K, Adediran SA, Pratt RF, Kelly JA. Silvaggi NR, et al. Among authors: kelly ja. Biochemistry. 2004 Jun 8;43(22):7046-53. doi: 10.1021/bi049612c. Biochemistry. 2004. PMID: 15170342
Structures of two kinetic intermediates reveal species specificity of penicillin-binding proteins.
McDonough MA, Anderson JW, Silvaggi NR, Pratt RF, Knox JR, Kelly JA. McDonough MA, et al. Among authors: kelly ja. J Mol Biol. 2002 Sep 6;322(1):111-22. doi: 10.1016/s0022-2836(02)00742-8. J Mol Biol. 2002. PMID: 12215418
The crystal structure of phosphonate-inhibited D-Ala-D-Ala peptidase reveals an analogue of a tetrahedral transition state.
Silvaggi NR, Anderson JW, Brinsmade SR, Pratt RF, Kelly JA. Silvaggi NR, et al. Among authors: kelly ja. Biochemistry. 2003 Feb 11;42(5):1199-208. doi: 10.1021/bi0268955. Biochemistry. 2003. PMID: 12564922
Crystallographic mapping of beta-lactams bound to a D-alanyl-D-alanine peptidase target enzyme.
Kelly JA, Knox JR, Zhao H, Frère JM, Ghaysen JM. Kelly JA, et al. J Mol Biol. 1989 Sep 20;209(2):281-95. doi: 10.1016/0022-2836(89)90277-5. J Mol Biol. 1989. PMID: 2585485
Penicillin target enzyme and the antibiotic binding site.
Kelly JA, Moews PC, Knox JR, Frère JM, Ghuysen JM. Kelly JA, et al. Science. 1982 Oct 29;218(4571):479-81. doi: 10.1126/science.7123246. Science. 1982. PMID: 7123246
A 1.2-A snapshot of the final step of bacterial cell wall biosynthesis.
Lee W, McDonough MA, Kotra L, Li ZH, Silvaggi NR, Takeda Y, Kelly JA, Mobashery S. Lee W, et al. Among authors: kelly ja. Proc Natl Acad Sci U S A. 2001 Feb 13;98(4):1427-31. doi: 10.1073/pnas.98.4.1427. Proc Natl Acad Sci U S A. 2001. PMID: 11171967 Free PMC article.
The active-site-serine penicillin-recognizing enzymes as members of the Streptomyces R61 DD-peptidase family.
Joris B, Ghuysen JM, Dive G, Renard A, Dideberg O, Charlier P, Frère JM, Kelly JA, Boyington JC, Moews PC, et al. Joris B, et al. Among authors: kelly ja. Biochem J. 1988 Mar 1;250(2):313-24. doi: 10.1042/bj2500313. Biochem J. 1988. PMID: 3128280 Free PMC article.
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